RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 CCDC60Q8IWA6 550 aaPredicted RBP20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 CCDC155Q8N6L0 562 aa20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 DHX38Q92620 1227 aaKnown RBP20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 GJA10Q969M2 543 aa20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 SNX21Q969T3 373 aa20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 WNT8AQ9H1J5 351 aa20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 UNC45AQ9H3U1 944 aa20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 SETD4Q9NVD3 440 aa20.6■□□□□ 0.89
PDLIM7-209ENST00000503346 BACH1O14867 736 aa20.59■□□□□ 0.89
PDLIM7-209ENST00000503346 PSAPP07602 524 aa20.59■□□□□ 0.89
PDLIM7-209ENST00000503346 U2AF2P26368 475 aaKnown RBP eCLIP20.59■□□□□ 0.897e-7■■■□□ 15.8
PDLIM7-209ENST00000503346 SFNP31947 248 aa20.59■□□□□ 0.89
PDLIM7-209ENST00000503346 JAK3P52333 1124 aa20.59■□□□□ 0.89
PDLIM7-209ENST00000503346 PPIGQ13427 754 aaKnown RBP eCLIP20.59■□□□□ 0.891e-7■■■□□ 16.8
PDLIM7-209ENST00000503346 SERINC5Q86VE9 423 aa20.59■□□□□ 0.89
PDLIM7-209ENST00000503346 RDM1Q8NG50 284 aa20.59■□□□□ 0.89
PDLIM7-209ENST00000503346 LMBR1Q8WVP7 490 aa20.59■□□□□ 0.89
PDLIM7-209ENST00000503346 TNPO1Q92973 898 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-209ENST00000503346 ATP6V0A1Q93050 837 aa20.59■□□□□ 0.89
PDLIM7-209ENST00000503346 ZNF302Q9NR11 478 aa20.59■□□□□ 0.89
PDLIM7-209ENST00000503346 DISC1Q9NRI5 854 aa20.59■□□□□ 0.89
PDLIM7-209ENST00000503346 KIF28PB7ZC32 967 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 K7ELQ4 463 aaPredicted RBP20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 TREHO43280 583 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 CSF2RAP15509 400 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 EPHB4P54760 987 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 CCL23P55773 120 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 PPFIA1Q13136 1202 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 PLCB4Q15147 1175 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 TRIM71Q2Q1W2 868 aaKnown RBP20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 HABP4Q5JVS0 413 aaKnown RBP20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 SWSAP1Q6NVH7 229 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 POTEDQ86YR6 584 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 NOSTRINQ8IVI9 506 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 TDHQ8IZJ6 230 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 RETREG2Q8NC44 543 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 HAS1Q92839 578 aa20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 MAFBQ9Y5Q3 323 aaPredicted RBP20.58■□□□□ 0.89
PDLIM7-209ENST00000503346 WNT7AO00755 349 aa20.57■□□□□ 0.88
PDLIM7-209ENST00000503346 CHMP2AO43633 222 aa20.57■□□□□ 0.88
PDLIM7-209ENST00000503346 RANBP2P49792 3224 aaKnown RBP20.57■□□□□ 0.88
PDLIM7-209ENST00000503346 GNL2Q13823 731 aaKnown RBP20.57■□□□□ 0.88
PDLIM7-209ENST00000503346 GRIK4Q16099 956 aa20.57■□□□□ 0.88
PDLIM7-209ENST00000503346 PDXDC2PQ6P474 469 aa20.57■□□□□ 0.88
PDLIM7-209ENST00000503346 SLFN12Q8IYM2 578 aa20.57■□□□□ 0.88
PDLIM7-209ENST00000503346 ATP8B4Q8TF62 1192 aa20.57■□□□□ 0.88
PDLIM7-209ENST00000503346 WNT8BQ93098 351 aa20.57■□□□□ 0.88
PDLIM7-209ENST00000503346 VAV3Q9UKW4 847 aa20.57■□□□□ 0.88
PDLIM7-209ENST00000503346 SAMM50Q9Y512 469 aa20.57■□□□□ 0.88
PDLIM7-209ENST00000503346 IGSF9BQ9UPX0 1349 aa20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 POTEB3A0JP26 581 aa20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 MBLAC1A4D2B0 266 aaPredicted RBP20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 RRN3P2A6NIE6 340 aa20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 IQCF3P0C7M6 154 aa20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 INSRRP14616 1297 aa20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 ATP4AP20648 1035 aa20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 TRAPPC10P48553 1259 aa20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 PPP2R5CQ13362 524 aa20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 POTEBQ6S5H4 581 aa20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 INTS4Q96HW7 963 aaKnown RBP20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 IL23AQ9NPF7 189 aa20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 GABBR1Q9UBS5 961 aa20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 TRPC6Q9Y210 931 aa20.56■□□□□ 0.88
PDLIM7-209ENST00000503346 MARCH6O60337 910 aa20.55■□□□□ 0.88
PDLIM7-209ENST00000503346 HBP1O60381 514 aa20.55■□□□□ 0.88
PDLIM7-209ENST00000503346 NEMFO60524 1076 aa20.55■□□□□ 0.88
PDLIM7-209ENST00000503346 BAG4O95429 457 aaKnown RBP20.55■□□□□ 0.88
PDLIM7-209ENST00000503346 CKBP12277 381 aa20.55■□□□□ 0.88
PDLIM7-209ENST00000503346 SELPP16109 830 aa20.55■□□□□ 0.88
PDLIM7-209ENST00000503346 RFC2P35250 354 aa20.55■□□□□ 0.88
PDLIM7-209ENST00000503346 ORC2Q13416 577 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-209ENST00000503346 MARCH8Q5T0T0 291 aa20.55■□□□□ 0.88
PDLIM7-209ENST00000503346 MIER3Q7Z3K6 550 aa20.55■□□□□ 0.88
PDLIM7-209ENST00000503346 SCLYQ96I15 445 aa20.55■□□□□ 0.88
PDLIM7-209ENST00000503346 H3BQV1 296 aa20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 CAND2O75155 1236 aa20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 SHHQ15465 462 aa20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 CALCRLQ16602 461 aa20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 C9orf50Q5SZB4 431 aa20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 LARP1BQ659C4 914 aaKnown RBP20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 TAF2Q6P1X5 1199 aa20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 TRAF7Q6Q0C0 670 aa20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 LRRC8DQ7L1W4 858 aa20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 C16orf59Q7L2K0 433 aa20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 VWCEQ96DN2 955 aa20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 MTMR9Q96QG7 549 aa20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 TUBE1Q9UJT0 475 aa20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 NOL7Q9UMY1 257 aaKnown RBP20.54■□□□□ 0.88
PDLIM7-209ENST00000503346 PARNO95453 639 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-209ENST00000503346 PFKMP08237 780 aa20.53■□□□□ 0.88
PDLIM7-209ENST00000503346 ATP2B1P20020 1258 aa20.53■□□□□ 0.88
PDLIM7-209ENST00000503346 TMEM240Q5SV17 173 aa20.53■□□□□ 0.88
PDLIM7-209ENST00000503346 PSRC1Q6PGN9 363 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-209ENST00000503346 RPAINQ86UA6 219 aa20.53■□□□□ 0.88
PDLIM7-209ENST00000503346 CKAP2LQ8IYA6 745 aa20.53■□□□□ 0.88
PDLIM7-209ENST00000503346 RPUSD2Q8IZ73 545 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-209ENST00000503346 BBXQ8WY36 941 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-209ENST00000503346 FAM167AQ96KS9 214 aa20.53■□□□□ 0.88
PDLIM7-209ENST00000503346 COL1A2P08123 1366 aa20.53■□□□□ 0.88
PDLIM7-209ENST00000503346 EML1O00423 815 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms