RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 COG5Q9UP83 839 aa12.31□□□□□ -0.44
SNCA-207ENST00000502987 BDP1A6H8Y1 2624 aa12.3□□□□□ -0.44
SNCA-207ENST00000502987 STK25O00506 426 aa12.3□□□□□ -0.44
SNCA-207ENST00000502987 NECTIN1Q15223 517 aa12.3□□□□□ -0.44
SNCA-207ENST00000502987 PLEKHG4Q58EX7 1191 aa12.3□□□□□ -0.44
SNCA-207ENST00000502987 SEPT1Q8WYJ6 367 aa12.3□□□□□ -0.44
SNCA-207ENST00000502987 GPRASP2Q96D09 838 aa12.3□□□□□ -0.44
SNCA-207ENST00000502987 NECAB3Q96P71 396 aaPredicted RBP12.3□□□□□ -0.44
SNCA-207ENST00000502987 SUGCTQ9HAC7 445 aa12.3□□□□□ -0.44
SNCA-207ENST00000502987 PCDHA6Q9UN73 950 aa12.3□□□□□ -0.44
SNCA-207ENST00000502987 TELO2Q9Y4R8 837 aa12.3□□□□□ -0.44
SNCA-207ENST00000502987 PCDHA8Q9Y5H6 950 aa12.3□□□□□ -0.44
SNCA-207ENST00000502987 COL4A4P53420 1690 aaPredicted RBP12.29□□□□□ -0.44
SNCA-207ENST00000502987 LINC01553A4QN01 128 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 ATP9AO75110 1047 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 BMP1P13497 986 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 MARK3P27448 753 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 ERVK-21P61565 698 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 FGD1P98174 961 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 MTMR1Q13613 665 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 RSPH3Q86UC2 560 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 NEK1Q96PY6 1258 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 YME1L1Q96TA2 773 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 LMCD1Q9NZU5 365 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 SIP14410 1827 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 NRCAMQ92823 1304 aa12.29□□□□□ -0.44
SNCA-207ENST00000502987 CAND2O75155 1236 aa12.28□□□□□ -0.44
SNCA-207ENST00000502987 NAPAP54920 295 aa12.28□□□□□ -0.44
SNCA-207ENST00000502987 IGBP1P78318 339 aa12.28□□□□□ -0.44
SNCA-207ENST00000502987 PPFIA1Q13136 1202 aa12.28□□□□□ -0.44
SNCA-207ENST00000502987 COL9A3Q14050 684 aaPredicted RBP12.28□□□□□ -0.44
SNCA-207ENST00000502987 TMTC3Q6ZXV5 915 aa12.28□□□□□ -0.44
SNCA-207ENST00000502987 LMBR1Q8WVP7 490 aa12.28□□□□□ -0.44
SNCA-207ENST00000502987 C17orf80Q9BSJ5 609 aa12.28□□□□□ -0.44
SNCA-207ENST00000502987 IFIH1Q9BYX4 1025 aaKnown RBP12.28□□□□□ -0.44
SNCA-207ENST00000502987 SMARCAD1Q9H4L7 1026 aa12.28□□□□□ -0.44
SNCA-207ENST00000502987 RBM28Q9NW13 759 aaKnown RBP12.28□□□□□ -0.44
SNCA-207ENST00000502987 ERAP1Q9NZ08 941 aa12.28□□□□□ -0.44
SNCA-207ENST00000502987 NCOR1O75376 2440 aa12.27□□□□□ -0.44
SNCA-207ENST00000502987 GSTTP1A0A1W2PQM5 241 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 ZBTB43O43298 467 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 LPXNO60711 386 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 KCNA2P16389 499 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 ITGB5P18084 799 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 HOXC8P31273 242 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 ZNF76P36508 570 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 GRIK4Q16099 956 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 RTN1Q16799 776 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 SKAP1Q86WV1 359 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 APBB2Q92870 758 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 TCEANC2Q96MN5 208 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 OSBPL7Q9BZF2 842 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 AZI2Q9H6S1 392 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 JADE2Q9NQC1 790 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 UBIAD1Q9Y5Z9 338 aa12.27□□□□□ -0.45
SNCA-207ENST00000502987 V9GY48 417 aaPredicted RBP12.27□□□□□ -0.45
SNCA-207ENST00000502987 MUC3AQ02505 3323 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 NLRC5Q86WI3 1866 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 GOLGA8AA7E2F4 631 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 GOLGA8BA8MQT2 603 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 MAFGO15525 162 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 GHRP10912 638 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 COL9A1P20849 921 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 ADCY7P51828 1080 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 PTPROQ16827 1216 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 BMP2KLQ5H9B9 411 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 TAF2Q6P1X5 1199 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 APOA5Q6Q788 366 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 RUFY4Q6ZNE9 571 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 EP400NLQ6ZTU2 488 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 CENPQQ7L2Z9 268 aaPredicted RBP12.26□□□□□ -0.45
SNCA-207ENST00000502987 DHX32Q7L7V1 743 aaKnown RBP12.26□□□□□ -0.45
SNCA-207ENST00000502987 SGMS1Q86VZ5 419 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 DNAJB3Q8WWF6 145 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 TNPO1Q92973 898 aaKnown RBP12.26□□□□□ -0.45
SNCA-207ENST00000502987 TOP1MTQ969P6 601 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 PGBD1Q96JS3 809 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 SAMD11Q96NU1 681 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 MXRA8Q9BRK3 442 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 SDF4Q9BRK5 362 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 SLC9A2Q9UBY0 812 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 TUBE1Q9UJT0 475 aa12.26□□□□□ -0.45
SNCA-207ENST00000502987 LOXHD1Q8IVV2 1947 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 KLF18A0A0U1RQI7 1052 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.25□□□□□ -0.45
SNCA-207ENST00000502987 SMCO2A6NFE2 343 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 FOSP01100 380 aaPredicted RBP12.25□□□□□ -0.45
SNCA-207ENST00000502987 CHRNA1P02708 482 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 ADAM17P78536 824 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 HTRA4P83105 476 aaPredicted RBP12.25□□□□□ -0.45
SNCA-207ENST00000502987 GPM6BQ13491 265 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 KRT32Q14532 448 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 EPC2Q52LR7 807 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 FAM26DQ5JW98 314 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 WWC2Q6AWC2 1192 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 TMEM192Q8IY95 271 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 FIBCD1Q8N539 461 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 IL17RAQ96F46 866 aa12.25□□□□□ -0.45
SNCA-207ENST00000502987 FAM49AQ9H0Q0 323 aaPredicted RBP12.25□□□□□ -0.45
SNCA-207ENST00000502987 JPH1Q9HDC5 661 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms