RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 TRIM50Q86XT4 487 aa11.91□□□□□ -0.5
FXR1-222ENST00000498658 NSUN7Q8NE18 718 aaKnown RBP11.91□□□□□ -0.5
FXR1-222ENST00000498658 PPP1R13LQ8WUF5 828 aa11.91□□□□□ -0.5
FXR1-222ENST00000498658 SCLYQ96I15 445 aa11.91□□□□□ -0.5
FXR1-222ENST00000498658 LRCH3Q96II8 777 aa11.91□□□□□ -0.5
FXR1-222ENST00000498658 CTAGE1Q96RT6 745 aa11.91□□□□□ -0.5
FXR1-222ENST00000498658 KIF2CQ99661 725 aa11.91□□□□□ -0.5
FXR1-222ENST00000498658 SETD4Q9NVD3 440 aa11.91□□□□□ -0.5
FXR1-222ENST00000498658 PCDH10Q9P2E7 1040 aa11.91□□□□□ -0.5
FXR1-222ENST00000498658 KCNJ14Q9UNX9 436 aa11.91□□□□□ -0.5
FXR1-222ENST00000498658 SZT2Q5T011 3432 aa11.91□□□□□ -0.5
FXR1-222ENST00000498658 TMEM265A0A087WTH1 108 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 IGKV6D-21A0A0A0MT36 114 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 DDX39AO00148 427 aaKnown RBP11.9□□□□□ -0.5
FXR1-222ENST00000498658 BACH1O14867 736 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 ADAMTS3O15072 1205 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 DHX15O43143 795 aaKnown RBP11.9□□□□□ -0.5
FXR1-222ENST00000498658 TREHO43280 583 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 GAS7O60861 476 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 EFCAB14O75071 495 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 BAIAP3O94812 1187 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 LARGE1O95461 756 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 PSAPP07602 524 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 FDPSP14324 419 aaKnown RBP11.9□□□□□ -0.5
FXR1-222ENST00000498658 SFNP31947 248 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 THPOP40225 353 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 MCM2P49736 904 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 ADAM17P78536 824 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 SAFBQ15424 915 aaKnown RBP eCLIP11.9□□□□□ -0.5
FXR1-222ENST00000498658 NPY5RQ15761 445 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 PPP4R3AQ6IN85 833 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 ABHD15Q6UXT9 468 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 OTOP2Q7RTS6 562 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 DEFB128Q7Z7B8 93 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 NEK8Q86SG6 692 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 RPAINQ86UA6 219 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 LMBR1Q8WVP7 490 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 LENG9Q96B70 501 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.5
FXR1-222ENST00000498658 TANC1Q9C0D5 1861 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 ZNF302Q9NR11 478 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 SAMM50Q9Y512 469 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 PCDHA10Q9Y5I2 948 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 SLC4A7Q9Y6M7 1214 aa11.9□□□□□ -0.5
FXR1-222ENST00000498658 TRIP12Q14669 1992 aaPredicted RBP11.9□□□□□ -0.5
FXR1-222ENST00000498658 WDR64B1ANS9 1081 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 RSPH10B2B2RC85 870 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 MSH4O15457 936 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 HBP1O60381 514 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 RSPH10BP0C881 870 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 MARK3P27448 753 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 JAK3P52333 1124 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 ZNF200P98182 395 aaPredicted RBP11.89□□□□□ -0.51
FXR1-222ENST00000498658 GRIK4Q16099 956 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 INF2Q27J81 1249 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 TRIM71Q2Q1W2 868 aaKnown RBP11.89□□□□□ -0.51
FXR1-222ENST00000498658 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 LRCH2Q5VUJ6 765 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 PDXDC2PQ6P474 469 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 RDM1Q8NG50 284 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 DHX38Q92620 1227 aaKnown RBP11.89□□□□□ -0.51
FXR1-222ENST00000498658 SLC5A5Q92911 643 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 MBOAT7Q96N66 472 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 PCYT2Q99447 389 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 TEKT3Q9BXF9 490 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 DDX25Q9UHL0 483 aaKnown RBP11.89□□□□□ -0.51
FXR1-222ENST00000498658 TUBE1Q9UJT0 475 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 KIF3AQ9Y496 699 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 TELO2Q9Y4R8 837 aa11.89□□□□□ -0.51
FXR1-222ENST00000498658 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 ZBBXA8MT70 800 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 JAK2O60674 1132 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 CCNE2O96020 404 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 CXCL10P02778 98 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 MMP1P03956 469 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 INSRRP14616 1297 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 HIC1Q14526 733 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 PLCB4Q15147 1175 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 RAB30Q15771 203 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 LETM2Q2VYF4 491 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 ZNF618Q5T7W0 954 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 SWSAP1Q6NVH7 229 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 CNKSR3Q6P9H4 555 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 PIK3AP1Q6ZUJ8 805 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 CCDC83Q8IWF9 413 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 DEFB123Q8N688 67 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 FAM184AQ8NB25 1140 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 PHOSPHO2Q8TCD6 241 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 ATP8B4Q8TF62 1192 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 FAM167AQ96KS9 214 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 FAM20AQ96MK3 541 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 SLC9A7Q96T83 725 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 CEP131Q9UPN4 1083 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 MAFBQ9Y5Q3 323 aaPredicted RBP11.88□□□□□ -0.51
FXR1-222ENST00000498658 COL1A2P08123 1366 aa11.88□□□□□ -0.51
FXR1-222ENST00000498658 ABHD14A-ACY1A0A1B0GW23 586 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 MBLAC1A4D2B0 266 aaPredicted RBP11.87□□□□□ -0.51
FXR1-222ENST00000498658 TBX3O15119 743 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms