RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 SCRN1Q12765 414 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 IKBKEQ14164 716 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 MARCH8Q5T0T0 291 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 NIPA1Q7RTP0 329 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 TRIM22Q8IYM9 498 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 CCDC148Q8NFR7 591 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 TRAPPC12Q8WVT3 735 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 GAS2L1Q99501 681 aaPredicted RBP18.33■□□□□ 0.52
NR1H3-227ENST00000498548 AZI2Q9H6S1 392 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 TPCN1Q9ULQ1 816 aa18.33■□□□□ 0.52
NR1H3-227ENST00000498548 EMSYQ7Z589 1322 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 ABHD14A-ACY1A0A1B0GW23 586 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 DHX15O43143 795 aaKnown RBP18.32■□□□□ 0.52
NR1H3-227ENST00000498548 TLL1O43897 1013 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 ATG7O95352 703 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 INSRRP14616 1297 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 STAT5BP51692 787 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 PLCB4Q15147 1175 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 PRR16Q569H4 304 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 SPRED2Q7Z698 418 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 USP38Q8NB14 1042 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 BICD2Q8TD16 824 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 DNAJB3Q8WWF6 145 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 ZNF577Q9BSK1 485 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 ZBED2Q9BTP6 218 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 TRPC6Q9Y210 931 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 MICAL3Q7RTP6 2002 aa18.32■□□□□ 0.52
NR1H3-227ENST00000498548 LCHNA4D1U4 455 aa18.31■□□□□ 0.52
NR1H3-227ENST00000498548 KIF28PB7ZC32 967 aa18.31■□□□□ 0.52
NR1H3-227ENST00000498548 DEXIO95424 95 aa18.31■□□□□ 0.52
NR1H3-227ENST00000498548 CHRNA1P02708 482 aa18.31■□□□□ 0.52
NR1H3-227ENST00000498548 PLEKHG4Q58EX7 1191 aa18.31■□□□□ 0.52
NR1H3-227ENST00000498548 MCTP2Q6DN12 878 aa18.31■□□□□ 0.52
NR1H3-227ENST00000498548 ABHD15Q6UXT9 468 aa18.31■□□□□ 0.52
NR1H3-227ENST00000498548 SLKQ9H2G2 1235 aaPredicted RBP18.31■□□□□ 0.52
NR1H3-227ENST00000498548 SH3GLB2Q9NR46 395 aa18.31■□□□□ 0.52
NR1H3-227ENST00000498548 TUBE1Q9UJT0 475 aa18.31■□□□□ 0.52
NR1H3-227ENST00000498548 IPO5O00410 1097 aaKnown RBP18.3■□□□□ 0.52
NR1H3-227ENST00000498548 BACH1O14867 736 aa18.3■□□□□ 0.52
NR1H3-227ENST00000498548 AK2P54819 239 aa18.3■□□□□ 0.52
NR1H3-227ENST00000498548 CCDC85BQ15834 202 aaPredicted RBP18.3■□□□□ 0.52
NR1H3-227ENST00000498548 FAM26DQ5JW98 314 aa18.3■□□□□ 0.52
NR1H3-227ENST00000498548 CPLX2Q6PUV4 134 aaKnown RBP18.3■□□□□ 0.52
NR1H3-227ENST00000498548 PLPPR4Q7Z2D5 763 aa18.3■□□□□ 0.52
NR1H3-227ENST00000498548 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.3■□□□□ 0.52
NR1H3-227ENST00000498548 FAM49AQ9H0Q0 323 aaPredicted RBP18.3■□□□□ 0.52
NR1H3-227ENST00000498548 PCDHA4Q9UN74 947 aa18.3■□□□□ 0.52
NR1H3-227ENST00000498548 KCNJ14Q9UNX9 436 aa18.3■□□□□ 0.52
NR1H3-227ENST00000498548 SIP14410 1827 aa18.3■□□□□ 0.52
NR1H3-227ENST00000498548 IGKV6D-21A0A0A0MT36 114 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 EPOPA6NHQ4 379 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 RRN3P2A6NIE6 340 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 CAND2O75155 1236 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 CIITAP33076 1130 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 ANAPC15P60006 121 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 TAP1Q03518 808 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 MGAT3Q09327 533 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 SWSAP1Q6NVH7 229 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 TRMT1LQ7Z2T5 733 aaKnown RBP18.29■□□□□ 0.52
NR1H3-227ENST00000498548 CCDC60Q8IWA6 550 aaPredicted RBP18.29■□□□□ 0.52
NR1H3-227ENST00000498548 BLIDQ8IZY5 108 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 NECAB1Q8N987 351 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 TBCKQ8TEA7 893 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 ARNTL2Q8WYA1 636 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 SEPT8Q92599 483 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 GJA10Q969M2 543 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 PRDM6Q9NQX0 595 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 GJB4Q9NTQ9 266 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 LOXHD1Q8IVV2 1947 aa18.29■□□□□ 0.52
NR1H3-227ENST00000498548 MYH9P35579 1960 aaKnown RBP18.28■□□□□ 0.52
NR1H3-227ENST00000498548 POTEB3A0JP26 581 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 MBLAC1A4D2B0 266 aaPredicted RBP18.28■□□□□ 0.52
NR1H3-227ENST00000498548 PFKFB2O60825 505 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 LARGE1O95461 756 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 GHRP10912 638 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 ATP4AP20648 1035 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 TMEM62Q0P6H9 643 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 POTEBQ6S5H4 581 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 MYOCDQ8IZQ8 938 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 LENG9Q96B70 501 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 ZNF302Q9NR11 478 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 CDY2AQ9Y6F7 541 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 EYSQ5T1H1 3165 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 EVPLQ92817 2033 aa18.28■□□□□ 0.52
NR1H3-227ENST00000498548 WDR81Q562E7 1941 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 DLL1O00548 723 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 EFCAB14O75071 495 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 UPP2O95045 317 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 GJB5O95377 273 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 CTDNEP1O95476 244 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 SETQ01105 290 aaPredicted RBP18.27■□□□□ 0.52
NR1H3-227ENST00000498548 MKRN4PQ13434 485 aaPredicted RBP18.27■□□□□ 0.52
NR1H3-227ENST00000498548 NPY5RQ15761 445 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 FAM160B1Q5W0V3 765 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 MIS18BP1Q6P0N0 1132 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 TAF2Q6P1X5 1199 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 PDXDC2PQ6P474 469 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 RPAINQ86UA6 219 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 RSPH3Q86UC2 560 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 MICALL1Q8N3F8 863 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms