RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 CLP1Q92989 425 aaKnown RBP13.87□□□□□ -0.19
THBS3-209ENST00000498500 MTA3Q9BTC8 594 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 PLVAPQ9BX97 442 aa13.87□□□□□ -0.19
THBS3-209ENST00000498500 USP34Q70CQ2 3546 aa13.86□□□□□ -0.19
THBS3-209ENST00000498500 ERICH2A1L162 156 aa13.86□□□□□ -0.19
THBS3-209ENST00000498500 KLRF2D3W0D1 207 aa13.86□□□□□ -0.19
THBS3-209ENST00000498500 PPP1R11O60927 126 aaPredicted RBP13.86□□□□□ -0.19
THBS3-209ENST00000498500 CHRNA1P02708 482 aa13.86□□□□□ -0.19
THBS3-209ENST00000498500 SART3Q15020 963 aaKnown RBP13.86□□□□□ -0.19
THBS3-209ENST00000498500 METTL7BQ6UX53 244 aa13.86□□□□□ -0.19
THBS3-209ENST00000498500 TRIM50Q86XT4 487 aa13.86□□□□□ -0.19
THBS3-209ENST00000498500 HOMER1Q86YM7 354 aa13.86□□□□□ -0.19
THBS3-209ENST00000498500 ZNF654Q8IZM8 581 aa13.86□□□□□ -0.19
THBS3-209ENST00000498500 LMBR1Q8WVP7 490 aa13.86□□□□□ -0.19
THBS3-209ENST00000498500 KCNB2Q92953 911 aa13.86□□□□□ -0.19
THBS3-209ENST00000498500 GPR20Q99678 358 aa13.86□□□□□ -0.19
THBS3-209ENST00000498500 PLAGL2Q9UPG8 496 aa13.86□□□□□ -0.19
THBS3-209ENST00000498500 PLXNA4Q9HCM2 1894 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 ENPP3O14638 875 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 CYTH3O43739 400 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 DDAH1O94760 285 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 MCM5P33992 734 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 ADAM17P78536 824 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 ZXDAP98168 799 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 SP4Q02446 784 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 TRAF1Q13077 416 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 ADCK5Q3MIX3 580 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 TSGA10IPQ3SY00 556 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 RSPH3Q86UC2 560 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 TMEM87BQ96K49 555 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 MSLNLQ96KJ4 702 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 MYL10Q9BUA6 226 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 LRRC2Q9BYS8 371 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 RC3H2Q9HBD1 1191 aaKnown RBP13.85□□□□□ -0.19
THBS3-209ENST00000498500 RTEL1Q9NZ71 1219 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 NRCAMQ92823 1304 aa13.85□□□□□ -0.19
THBS3-209ENST00000498500 STAM2O75886 525 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 DGKIO75912 1065 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 EYA4O95677 639 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 ICAM3P32942 547 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 MRPS9P82933 396 aaKnown RBP13.84□□□□□ -0.19
THBS3-209ENST00000498500 TCF15Q12870 199 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 CAMK1Q14012 370 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 LPIN1Q14693 890 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 RNF20Q5VTR2 975 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 TAF2Q6P1X5 1199 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 FBXL6Q8N531 539 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 P2RX5Q93086 422 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 ZNF689Q96CS4 500 aaPredicted RBP13.84□□□□□ -0.19
THBS3-209ENST00000498500 RIOX1Q9H6W3 641 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 EHMT1Q9H9B1 1298 aa13.84□□□□□ -0.19
THBS3-209ENST00000498500 SPATA31C2B4DYI2 1134 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 LOC730098B7Z3J9 87 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 FIBPO43427 364 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 GFRA3O60609 400 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 ITGB1P05556 798 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 HSPA4P34932 840 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 LIFRP42702 1097 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 NRIP1P48552 1158 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 NAALADL2Q58DX5 795 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 RUFY4Q6ZNE9 571 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 CATIPQ7Z7H3 387 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 ADGRD2Q7Z7M1 963 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 RBM23Q86U06 439 aaKnown RBP13.83□□□□□ -0.2
THBS3-209ENST00000498500 EFHBQ8N7U6 833 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 SMRP1Q8NCR6 262 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 INPP4AQ96PE3 977 aaPredicted RBP13.83□□□□□ -0.2
THBS3-209ENST00000498500 PIGSQ96S52 555 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 MAP3K14Q99558 947 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 FAM86C1Q9NVL1 165 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 CLEC1BQ9P126 229 aa13.83□□□□□ -0.2
THBS3-209ENST00000498500 MRPL42Q9Y6G3 142 aaKnown RBP13.83□□□□□ -0.2
THBS3-209ENST00000498500 DNAJB1P25685 340 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 EXOSC10Q01780 885 aaKnown RBP13.82□□□□□ -0.2
THBS3-209ENST00000498500 SIGLEC14Q08ET2 396 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 MGAT3Q09327 533 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 COASYQ13057 564 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 SEMA3FQ13275 785 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 PAN2Q504Q3 1202 aaKnown RBP13.82□□□□□ -0.2
THBS3-209ENST00000498500 FBXO47Q5MNV8 452 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 SGMS1Q86VZ5 419 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 KLHL23Q8NBE8 558 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 SPPL3Q8TCT6 385 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 POF1BQ8WVV4 589 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 RPGRIP1Q96KN7 1286 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 TCEANC2Q96MN5 208 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 NEK1Q96PY6 1258 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 BARX2Q9UMQ3 279 aaPredicted RBP13.82□□□□□ -0.2
THBS3-209ENST00000498500 USP15Q9Y4E8 981 aaPredicted RBP13.82□□□□□ -0.2
THBS3-209ENST00000498500 TELO2Q9Y4R8 837 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 SNX14Q9Y5W7 946 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 CDY2AQ9Y6F7 541 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 ZDBF2Q9HCK1 2354 aa13.82□□□□□ -0.2
THBS3-209ENST00000498500 PLEKHA8P1O95397 391 aa13.81□□□□□ -0.2
THBS3-209ENST00000498500 RXRAP19793 462 aa13.81□□□□□ -0.2
THBS3-209ENST00000498500 PPFIA1Q13136 1202 aa13.81□□□□□ -0.2
THBS3-209ENST00000498500 CBX2Q14781 532 aaPredicted RBP13.81□□□□□ -0.2
THBS3-209ENST00000498500 TSHZ1Q6ZSZ6 1077 aa13.81□□□□□ -0.2
THBS3-209ENST00000498500 RAB11FIP4Q86YS3 637 aa13.81□□□□□ -0.2
THBS3-209ENST00000498500 CMTR2Q8IYT2 770 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms