RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 CD52P31358 61 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 TCF7P36402 384 aaPredicted RBP13.47□□□□□ -0.25
CDK9-205ENST00000498339 IGBP1P78318 339 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 ADAM17P78536 824 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 MGAT3Q09327 533 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 NAALADL2Q58DX5 795 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 FBXO47Q5MNV8 452 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 NPAS4Q8IUM7 802 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 SPPL3Q8TCT6 385 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 DNAJB3Q8WWF6 145 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 INPP4AQ96PE3 977 aaPredicted RBP13.47□□□□□ -0.25
CDK9-205ENST00000498339 PIGSQ96S52 555 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 KRT23Q9C075 422 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 FAM49AQ9H0Q0 323 aaPredicted RBP13.47□□□□□ -0.25
CDK9-205ENST00000498339 CNNM2Q9H8M5 875 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 EHMT1Q9H9B1 1298 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 LRFN2Q9ULH4 789 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 PCDHGC5Q9Y5F6 944 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 SPATA31C2B4DYI2 1134 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 H0Y858 1186 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 PER2O15055 1255 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 STAG3L1P0CL83 205 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 SRGAP2BP0DMP2 458 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 SP100P23497 879 aaPredicted RBP13.46□□□□□ -0.25
CDK9-205ENST00000498339 AVPR2P30518 371 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 ICAM3P32942 547 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 MRPS6P82932 125 aaKnown RBP13.46□□□□□ -0.25
CDK9-205ENST00000498339 MRPS9P82933 396 aaKnown RBP13.46□□□□□ -0.25
CDK9-205ENST00000498339 SEMA3FQ13275 785 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 CBX2Q14781 532 aaPredicted RBP13.46□□□□□ -0.25
CDK9-205ENST00000498339 GRIK4Q16099 956 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 CWC27Q6UX04 472 aaKnown RBP13.46□□□□□ -0.25
CDK9-205ENST00000498339 PIBF1Q8WXW3 757 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 GLG1Q92896 1179 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 MTMR8Q96EF0 704 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 TLR9Q9NR96 1032 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 DIAPH3Q9NSV4 1193 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 MAD2L2Q9UI95 211 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 TELO2Q9Y4R8 837 aa13.46□□□□□ -0.25
CDK9-205ENST00000498339 DMDP11532 3685 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 GATMP50440 423 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 FOXK2Q01167 660 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 PAK2Q13177 524 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 PTPN21Q16825 1174 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 NLRX1Q86UT6 975 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 TICAM2Q86XR7 235 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 GIMAP8Q8ND71 665 aaPredicted RBP13.45□□□□□ -0.26
CDK9-205ENST00000498339 SMARCC2Q8TAQ2 1214 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 LINC01599Q8WXQ3 324 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 CUL5Q93034 780 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 ASIC4Q96FT7 647 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 NEK1Q96PY6 1258 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 FTHL17Q9BXU8 183 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 ERAP1Q9NZ08 941 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 PCDHB12Q9Y5F1 795 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 VPS13AQ96RL7 3174 aa13.45□□□□□ -0.26
CDK9-205ENST00000498339 FRMPD4Q14CM0 1322 aa13.44□□□□□ -0.26
CDK9-205ENST00000498339 FSD2A1L4K1 749 aa13.44□□□□□ -0.26
CDK9-205ENST00000498339 SCG2P13521 617 aa13.44□□□□□ -0.26
CDK9-205ENST00000498339 SDSP20132 328 aa13.44□□□□□ -0.26
CDK9-205ENST00000498339 TMEM62Q0P6H9 643 aa13.44□□□□□ -0.26
CDK9-205ENST00000498339 IER5Q5VY09 327 aa13.44□□□□□ -0.26
CDK9-205ENST00000498339 APOL5Q9BWW9 433 aa13.44□□□□□ -0.26
CDK9-205ENST00000498339 AGO3Q9H9G7 860 aaKnown RBP13.44□□□□□ -0.26
CDK9-205ENST00000498339 PKD2L1Q9P0L9 805 aa13.44□□□□□ -0.26
CDK9-205ENST00000498339 PNMA6FA0A0J9YX94 578 aa13.43□□□□□ -0.26
CDK9-205ENST00000498339 PALM3A6NDB9 673 aaPredicted RBP13.43□□□□□ -0.26
CDK9-205ENST00000498339 ATF7P17544 494 aaPredicted RBP13.43□□□□□ -0.26
CDK9-205ENST00000498339 RBM10P98175 930 aaKnown RBP13.43□□□□□ -0.26
CDK9-205ENST00000498339 THNSL1Q8IYQ7 743 aa13.43□□□□□ -0.26
CDK9-205ENST00000498339 ZBTB10Q96DT7 871 aa13.43□□□□□ -0.26
CDK9-205ENST00000498339 SENP7Q9BQF6 1050 aa13.43□□□□□ -0.26
CDK9-205ENST00000498339 LNPKQ9C0E8 428 aa13.43□□□□□ -0.26
CDK9-205ENST00000498339 AAASQ9NRG9 546 aa13.43□□□□□ -0.26
CDK9-205ENST00000498339 TRPV2Q9Y5S1 764 aa13.43□□□□□ -0.26
CDK9-205ENST00000498339 MYO10Q9HD67 2058 aa13.43□□□□□ -0.26
CDK9-205ENST00000498339 ERICH2A1L162 156 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 PDGFBP01127 241 aaPredicted RBP13.42□□□□□ -0.26
CDK9-205ENST00000498339 RPLP2P05387 115 aaKnown RBP13.42□□□□□ -0.26
CDK9-205ENST00000498339 TECP42680 631 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 TRDNQ13061 729 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 GRM4Q14833 912 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 DUSP6Q16828 381 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 PLPP4Q5VZY2 271 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 PCNX4Q63HM2 1172 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 LLGL2Q6P1M3 1020 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 SEPT1Q8WYJ6 367 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 CDCA3Q99618 268 aaPredicted RBP13.42□□□□□ -0.26
CDK9-205ENST00000498339 SMARCAD1Q9H4L7 1026 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 PADI3Q9ULW8 664 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 TRPC6Q9Y210 931 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 PCDHB7Q9Y5E2 793 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 EVPLQ92817 2033 aa13.42□□□□□ -0.26
CDK9-205ENST00000498339 MBLAC1A4D2B0 266 aaPredicted RBP13.41□□□□□ -0.26
CDK9-205ENST00000498339 TBKBP1A7MCY6 615 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 GALR2O43603 387 aaPredicted RBP13.41□□□□□ -0.26
CDK9-205ENST00000498339 FGF18O76093 207 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 UBE3AQ05086 875 aa13.41□□□□□ -0.26
CDK9-205ENST00000498339 NFX1Q12986 1120 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms