RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 CPLX1O14810 134 aa12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 ATP4AP20648 1035 aa12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 PBX2P40425 430 aa12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 RBM25P49756 843 aaKnown RBP12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 SETQ01105 290 aaPredicted RBP12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 Q4G0T1 1027 aa12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 ZNF746Q6NUN9 644 aaPredicted RBP12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 PLA2G4DQ86XP0 818 aa12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 BLIDQ8IZY5 108 aa12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 SLC5A5Q92911 643 aa12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 SDF4Q9BRK5 362 aa12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 OSBPL7Q9BZF2 842 aa12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 SLKQ9H2G2 1235 aaPredicted RBP12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 MTIF3Q9H2K0 278 aaKnown RBP12.4□□□□□ -0.42
SHROOM3-210ENST00000497440 TTC28Q96AY4 2481 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 ABHD14A-ACY1A0A1B0GW23 586 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 RRN3P2A6NIE6 340 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 RSPH10B2B2RC85 870 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 ZBTB42B2RXF5 422 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 MSH4O15457 936 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 CDKL5O76039 1030 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 LARGE1O95461 756 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 RSPH10BP0C881 870 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 INSRRP14616 1297 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 STAT5BP51692 787 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 NEK4P51957 841 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 MGAT3Q09327 533 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 STK3Q13188 491 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 PLCB4Q15147 1175 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 UTP14CQ5TAP6 766 aaKnown RBP12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 ZNF697Q5TEC3 545 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 TAF2Q6P1X5 1199 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 CNKSR3Q6P9H4 555 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 NSUN7Q8NE18 718 aaKnown RBP12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 TNFRSF25Q93038 417 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 RIT2Q99578 217 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 CDX2Q99626 313 aaPredicted RBP12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 YBX2Q9Y2T7 364 aaKnown RBP12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 PCDHA11Q9Y5I1 949 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 SLC4A7Q9Y6M7 1214 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 PTPRSQ13332 1948 aa12.39□□□□□ -0.43
SHROOM3-210ENST00000497440 EFCAB14O75071 495 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 PSMD10O75832 226 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 CHRNA1P02708 482 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 RPLP2P05387 115 aaKnown RBP12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 ACTN1P12814 892 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 POU3F3P20264 500 aaPredicted RBP12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 NLRP5P59047 1200 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 GRIN2CQ14957 1233 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 RAB30Q15771 203 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 GRIK4Q16099 956 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 PPP4R3AQ6IN85 833 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 FAM43BQ6ZT52 329 aaPredicted RBP12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 DEFB128Q7Z7B8 93 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 CCDC60Q8IWA6 550 aaPredicted RBP12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 SMAP1Q8IYB5 467 aaPredicted RBP12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 IL27Q8NEV9 243 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 ETNPPLQ8TBG4 499 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 TBCKQ8TEA7 893 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 TIFAQ96CG3 184 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 SLC9A7Q96T83 725 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 ZNF576Q9H609 170 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 GJB4Q9NTQ9 266 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 PCDHA2Q9Y5H9 948 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 SQORQ9Y6N5 450 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 WDR81Q562E7 1941 aa12.38□□□□□ -0.43
SHROOM3-210ENST00000497440 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 ATP2A2P16615 1042 aaKnown RBP12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 ZNF76P36508 570 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 THPOP40225 353 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 CHMP4BP1P59074 171 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 WDR5P61964 334 aaKnown RBP12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 KRT76Q01546 638 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 SP4Q02446 784 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 PPFIA1Q13136 1202 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 PRR16Q569H4 304 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 HERC6Q8IVU3 1022 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 CRIPAKQ8N1N5 446 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 DBF4BQ8NFT6 615 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 ATP8B4Q8TF62 1192 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 GLG1Q92896 1179 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 TNPO1Q92973 898 aaKnown RBP12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 ZNF577Q9BSK1 485 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 KCNMB3Q9NPA1 279 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 PKD2L1Q9P0L9 805 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 KCNJ14Q9UNX9 436 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 PCDHA10Q9Y5I2 948 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 GBF1Q92538 1859 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 NCOR1O75376 2440 aa12.37□□□□□ -0.43
SHROOM3-210ENST00000497440 COL1A2P08123 1366 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 SMIM35A0A1B0GVV1 85 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 HBP1O60381 514 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 STBD1O95210 358 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 RUFY4Q6ZNE9 571 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 KRT25Q7Z3Z0 450 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 NME8Q8N427 588 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 LINC01465Q8N7H1 131 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 NECAB1Q8N987 351 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 RDM1Q8NG50 284 aa12.36□□□□□ -0.43
SHROOM3-210ENST00000497440 OXER1Q8TDS5 423 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms