RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 ITGB3BPQ13352 177 aaPredicted RBP12.99□□□□□ -0.33
HLA-B-254ENST00000497377 Q4G0T1 1027 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 KRT40Q6A162 431 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 BADQ92934 168 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 TNPO1Q92973 898 aaKnown RBP12.99□□□□□ -0.33
HLA-B-254ENST00000497377 LENG9Q96B70 501 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 C8orf76Q96K31 380 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 MBOAT7Q96N66 472 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 RIT2Q99578 217 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 UBE2OQ9C0C9 1292 aaKnown RBP12.99□□□□□ -0.33
HLA-B-254ENST00000497377 HIPK3Q9H422 1215 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 SMARCAD1Q9H4L7 1026 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 AZI2Q9H6S1 392 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 TRMT13Q9NUP7 481 aaKnown RBP12.99□□□□□ -0.33
HLA-B-254ENST00000497377 ERAP1Q9NZ08 941 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 HDAC6Q9UBN7 1215 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 NOD1Q9Y239 953 aa12.99□□□□□ -0.33
HLA-B-254ENST00000497377 DHX15O43143 795 aaKnown RBP12.98□□□□□ -0.33
HLA-B-254ENST00000497377 EDIL3O43854 480 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 DTNBO60941 627 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 LGR5O75473 907 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 ATG7O95352 703 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 SLC26A2P50443 739 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 KRT76Q01546 638 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 BFSP2Q13515 415 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 PTGISQ16647 500 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 INF2Q27J81 1249 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 UTP14CQ5TAP6 766 aaKnown RBP12.98□□□□□ -0.33
HLA-B-254ENST00000497377 PPP4R3AQ6IN85 833 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 GDF6Q6KF10 455 aaPredicted RBP12.98□□□□□ -0.33
HLA-B-254ENST00000497377 MFSD5Q6N075 450 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 ZNF746Q6NUN9 644 aaPredicted RBP12.98□□□□□ -0.33
HLA-B-254ENST00000497377 PIK3AP1Q6ZUJ8 805 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 DIS3L2Q8IYB7 885 aaKnown RBP12.98□□□□□ -0.33
HLA-B-254ENST00000497377 TMEM199Q8N511 208 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 CCDC155Q8N6L0 562 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 OXER1Q8TDS5 423 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 GLG1Q92896 1179 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 TNFRSF25Q93038 417 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 KAT6AQ92794 2004 aa12.98□□□□□ -0.33
HLA-B-254ENST00000497377 MSH4O15457 936 aa12.97□□□□□ -0.33
HLA-B-254ENST00000497377 CD2BP2O95400 341 aaKnown RBP12.97□□□□□ -0.33
HLA-B-254ENST00000497377 ITGB8P26012 769 aa12.97□□□□□ -0.33
HLA-B-254ENST00000497377 HOXC8P31273 242 aa12.97□□□□□ -0.33
HLA-B-254ENST00000497377 FPGSQ05932 587 aa12.97□□□□□ -0.33
HLA-B-254ENST00000497377 NR5A1Q13285 461 aa12.97□□□□□ -0.33
HLA-B-254ENST00000497377 PPIGQ13427 754 aaKnown RBP eCLIP12.97□□□□□ -0.33
HLA-B-254ENST00000497377 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
HLA-B-254ENST00000497377 MIS18BP1Q6P0N0 1132 aa12.97□□□□□ -0.33
HLA-B-254ENST00000497377 PLPPR4Q7Z2D5 763 aa12.97□□□□□ -0.33
HLA-B-254ENST00000497377 TRIM50Q86XT4 487 aa12.97□□□□□ -0.33
HLA-B-254ENST00000497377 SMAP1Q8IYB5 467 aaPredicted RBP12.97□□□□□ -0.33
HLA-B-254ENST00000497377 FBXO18Q8NFZ0 1043 aa12.97□□□□□ -0.33
HLA-B-254ENST00000497377 CAGE1Q8TC20 777 aa12.97□□□□□ -0.33
HLA-B-254ENST00000497377 SLC5A5Q92911 643 aa12.97□□□□□ -0.33
HLA-B-254ENST00000497377 NOC4LQ9BVI4 516 aaKnown RBP12.97□□□□□ -0.33
HLA-B-254ENST00000497377 DDX25Q9UHL0 483 aaKnown RBP12.97□□□□□ -0.33
HLA-B-254ENST00000497377 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.97□□□□□ -0.33
HLA-B-254ENST00000497377 RANBP2P49792 3224 aaKnown RBP12.96□□□□□ -0.33
HLA-B-254ENST00000497377 NRCAMQ92823 1304 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 IGKV6D-21A0A0A0MT36 114 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 C17orf102A2RUQ5 167 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 BTBD18B2RXH4 712 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 TBX3O15119 743 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 GAS7O60861 476 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 TDP2O95551 362 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 SMIM10L2AP0DMW4 78 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 SMIM10L2BP0DMW5 78 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 CYP2C9P11712 490 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 SFNP31947 248 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 STAT5BP51692 787 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 RBL2Q08999 1139 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 PTK7Q13308 1070 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 LRCH2Q5VUJ6 765 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 FAM160B1Q5W0V3 765 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 ABHD15Q6UXT9 468 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 TDHQ8IZJ6 230 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 RETREG2Q8NC44 543 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 RDM1Q8NG50 284 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 AFAP1L1Q8TED9 768 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 FAM20AQ96MK3 541 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 TEKT3Q9BXF9 490 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 PPP1R12CQ9BZL4 782 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 FOXP1Q9H334 677 aaPredicted RBP12.96□□□□□ -0.33
HLA-B-254ENST00000497377 TELO2Q9Y4R8 837 aa12.96□□□□□ -0.33
HLA-B-254ENST00000497377 MYH9P35579 1960 aaKnown RBP12.95□□□□□ -0.34
HLA-B-254ENST00000497377 TRIP12Q14669 1992 aaPredicted RBP12.95□□□□□ -0.34
HLA-B-254ENST00000497377 WDR64B1ANS9 1081 aa12.95□□□□□ -0.34
HLA-B-254ENST00000497377 DDX39AO00148 427 aaKnown RBP12.95□□□□□ -0.34
HLA-B-254ENST00000497377 CCNT1O60563 726 aaKnown RBP12.95□□□□□ -0.34
HLA-B-254ENST00000497377 PARNO95453 639 aaKnown RBP12.95□□□□□ -0.34
HLA-B-254ENST00000497377 CCNE2O96020 404 aa12.95□□□□□ -0.34
HLA-B-254ENST00000497377 PSAPP07602 524 aa12.95□□□□□ -0.34
HLA-B-254ENST00000497377 JAK3P52333 1124 aa12.95□□□□□ -0.34
HLA-B-254ENST00000497377 FOSBP53539 338 aa12.95□□□□□ -0.34
HLA-B-254ENST00000497377 HABP4Q5JVS0 413 aaKnown RBP12.95□□□□□ -0.34
HLA-B-254ENST00000497377 SERINC5Q86VE9 423 aa12.95□□□□□ -0.34
HLA-B-254ENST00000497377 ETNPPLQ8TBG4 499 aa12.95□□□□□ -0.34
HLA-B-254ENST00000497377 ATP6V0A1Q93050 837 aa12.95□□□□□ -0.34
HLA-B-254ENST00000497377 PCYT2Q99447 389 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms