RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 HERC6Q8IVU3 1022 aa11.95□□□□□ -0.5
ERGIC3-219ENST00000496172 SEPT1Q8WYJ6 367 aa11.95□□□□□ -0.5
ERGIC3-219ENST00000496172 ATP6V0A1Q93050 837 aa11.95□□□□□ -0.5
ERGIC3-219ENST00000496172 PHKBQ93100 1093 aa11.95□□□□□ -0.5
ERGIC3-219ENST00000496172 ZNF274Q96GC6 653 aaPredicted RBP11.95□□□□□ -0.5
ERGIC3-219ENST00000496172 UPF3BQ9BZI7 483 aaKnown RBP11.95□□□□□ -0.5
ERGIC3-219ENST00000496172 ZMYND12Q9H0C1 365 aa11.95□□□□□ -0.5
ERGIC3-219ENST00000496172 TMEM260Q9NX78 707 aa11.95□□□□□ -0.5
ERGIC3-219ENST00000496172 PKD2L1Q9P0L9 805 aa11.95□□□□□ -0.5
ERGIC3-219ENST00000496172 CFAP54Q96N23 3096 aa11.95□□□□□ -0.5
ERGIC3-219ENST00000496172 TRIOO75962 3097 aa11.95□□□□□ -0.5
ERGIC3-219ENST00000496172 KIF28PB7ZC32 967 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 DCXO43602 365 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 CKBP12277 381 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 TCF7P36402 384 aaPredicted RBP11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 SREBF1P36956 1147 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 CLK2P49760 499 aaKnown RBP11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 ARHGAP4P98171 946 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 SSRP1Q08945 709 aaKnown RBP11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 RBL2Q08999 1139 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 TOB2Q14106 344 aaPredicted RBP11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 CSPP1Q1MSJ5 1256 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 REXO1Q8N1G1 1221 aaKnown RBP11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 GLG1Q92896 1179 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 TNPO1Q92973 898 aaKnown RBP11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 PGBD1Q96JS3 809 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 CTAGE1Q96RT6 745 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 SMARCAD1Q9H4L7 1026 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 NCOA5Q9HCD5 579 aaKnown RBP11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 JPH1Q9HDC5 661 aaPredicted RBP11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 KCNH7Q9NS40 1196 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 ERAP1Q9NZ08 941 aa11.94□□□□□ -0.5
ERGIC3-219ENST00000496172 CDKL5O76039 1030 aa11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 THPOP40225 353 aa11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 ANAPC15P60006 121 aa11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 ZNF200P98182 395 aaPredicted RBP11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 ANKRD1Q15327 319 aa11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 NTRK3Q16288 839 aa11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 PKN1Q16512 942 aa11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 PUS10Q3MIT2 529 aaKnown RBP11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 NIPA1Q7RTP0 329 aa11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 SERINC5Q86VE9 423 aa11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 DHX38Q92620 1227 aaKnown RBP11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 RNPEPQ9H4A4 650 aa11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 AZI2Q9H6S1 392 aa11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 SH3GLB2Q9NR46 395 aa11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 SLC9A2Q9UBY0 812 aa11.93□□□□□ -0.5
ERGIC3-219ENST00000496172 NFASCO94856 1347 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 EMSYQ7Z589 1322 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 NRCAMQ92823 1304 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 GSTTP1A0A1W2PQM5 241 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 RSPH10B2B2RC85 870 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 MEIS1O00470 390 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 PPFIA3O75145 1194 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 DEXIO95424 95 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 RSPH10BP0C881 870 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 IL9P15248 144 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 KCNJ6P48051 423 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 NLRP5P59047 1200 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 FOXK2Q01167 660 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 STK3Q13188 491 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 ZNF618Q5T7W0 954 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 TRIM50Q86XT4 487 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 CYP2W1Q8TAV3 490 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 UIMC1Q96RL1 719 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 LARP6Q9BRS8 491 aaKnown RBP11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 SLKQ9H2G2 1235 aaPredicted RBP11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 AGO4Q9HCK5 861 aaKnown RBP11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 SETD4Q9NVD3 440 aa11.92□□□□□ -0.5
ERGIC3-219ENST00000496172 GRXCR2A6NFK2 248 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 TREHO43280 583 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 ST18O60284 1047 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 EFCAB14O75071 495 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 CAND2O75155 1236 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 CYP3A4P08684 503 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 ARP10275 920 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 HOXC8P31273 242 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 SSTR3P32745 418 aaPredicted RBP11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 SETQ01105 290 aaPredicted RBP11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 PPFIA1Q13136 1202 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 HIC1Q14526 733 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 TRIM71Q2Q1W2 868 aaKnown RBP11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 PTCRAQ6ISU1 281 aaPredicted RBP11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 CNKSR3Q6P9H4 555 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 SPRED2Q7Z698 418 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 PLA2G4DQ86XP0 818 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 NEK9Q8TD19 979 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 GDPD5Q8WTR4 605 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 VPS54Q9P1Q0 977 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 PRKAG3Q9UGI9 489 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 TCEAL9Q9UHQ7 104 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 TELO2Q9Y4R8 837 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 CACNA1HO95180 2353 aa11.91□□□□□ -0.5
ERGIC3-219ENST00000496172 SPTBN4Q9H254 2564 aa11.9□□□□□ -0.5
ERGIC3-219ENST00000496172 ABHD14A-ACY1A0A1B0GW23 586 aa11.9□□□□□ -0.5
ERGIC3-219ENST00000496172 NBNO60934 754 aa11.9□□□□□ -0.5
ERGIC3-219ENST00000496172 TECTAO75443 2155 aa11.9□□□□□ -0.5
ERGIC3-219ENST00000496172 CXCL10P02778 98 aa11.9□□□□□ -0.5
ERGIC3-219ENST00000496172 MARK3P27448 753 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms