RNA–Protein interactions for RNA: ENST00000495805.5

PSMB4-207, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 811 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-207ENST00000495805 RFC2P35250 354 aa15.25■□□□□ 0.03
PSMB4-207ENST00000495805 JAK3P52333 1124 aa15.25■□□□□ 0.03
PSMB4-207ENST00000495805 CCL23P55773 120 aa15.25■□□□□ 0.03
PSMB4-207ENST00000495805 PPFIA1Q13136 1202 aa15.25■□□□□ 0.03
PSMB4-207ENST00000495805 SWSAP1Q6NVH7 229 aa15.25■□□□□ 0.03
PSMB4-207ENST00000495805 PDXDC2PQ6P474 469 aa15.25■□□□□ 0.03
PSMB4-207ENST00000495805 RDM1Q8NG50 284 aa15.25■□□□□ 0.03
PSMB4-207ENST00000495805 IL23AQ9NPF7 189 aa15.25■□□□□ 0.03
PSMB4-207ENST00000495805 ZNF302Q9NR11 478 aa15.25■□□□□ 0.03
PSMB4-207ENST00000495805 SETD4Q9NVD3 440 aa15.25■□□□□ 0.03
PSMB4-207ENST00000495805 SMC3Q9UQE7 1217 aa15.25■□□□□ 0.03
PSMB4-207ENST00000495805 TRPC6Q9Y210 931 aa15.25■□□□□ 0.03
PSMB4-207ENST00000495805 POTEB3A0JP26 581 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 PSMD10O75832 226 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 RPLP2P05387 115 aaKnown RBP15.24■□□□□ 0.03
PSMB4-207ENST00000495805 PFKMP08237 780 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 SELPP16109 830 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 HOXC8P31273 242 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 ZNF200P98182 395 aaPredicted RBP15.24■□□□□ 0.03
PSMB4-207ENST00000495805 PSRC1Q6PGN9 363 aaPredicted RBP15.24■□□□□ 0.03
PSMB4-207ENST00000495805 POTEBQ6S5H4 581 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 SERINC5Q86VE9 423 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 CKAP2LQ8IYA6 745 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 SLFN12Q8IYM2 578 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 ETNPPLQ8TBG4 499 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 PCYT2Q99447 389 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 DISC1Q9NRI5 854 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 PCDH10Q9P2E7 1040 aa15.24■□□□□ 0.03
PSMB4-207ENST00000495805 UMODL1Q5DID0 1318 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 TRIOBPQ9H2D6 2365 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 H3BQV1 296 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 TREHO43280 583 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 CHMP2AO43633 222 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 SLC37A4O43826 429 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 CAND2O75155 1236 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 IQCF3P0C7M6 154 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 CKBP12277 381 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 GJB2P29033 226 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 RBL2Q08999 1139 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 PLCB4Q15147 1175 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 GRIK4Q16099 956 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 EARS2Q5JPH6 523 aaKnown RBP15.23■□□□□ 0.03
PSMB4-207ENST00000495805 TAF2Q6P1X5 1199 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 MIER3Q7Z3K6 550 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 RSPH3Q86UC2 560 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 CCDC60Q8IWA6 550 aaPredicted RBP15.23■□□□□ 0.03
PSMB4-207ENST00000495805 LMBR1Q8WVP7 490 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 CTAGE1Q96RT6 745 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 WNT8AQ9H1J5 351 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 MTIF3Q9H2K0 278 aaKnown RBP15.23■□□□□ 0.03
PSMB4-207ENST00000495805 KCNMB3Q9NPA1 279 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 LAMA3Q16787 3333 aa15.23■□□□□ 0.03
PSMB4-207ENST00000495805 HBP1O60381 514 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 FGBP02675 491 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 INSRRP14616 1297 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 THPOP40225 353 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 ORC2Q13416 577 aaPredicted RBP15.22■□□□□ 0.03
PSMB4-207ENST00000495805 SHHQ15465 462 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 LRIT3Q3SXY7 679 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 LRRC8DQ7L1W4 858 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 NOSTRINQ8IVI9 506 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 ATP8B4Q8TF62 1192 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 SCLYQ96I15 445 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 FAM167AQ96KS9 214 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 RNPC3Q96LT9 517 aaKnown RBP15.22■□□□□ 0.03
PSMB4-207ENST00000495805 UNC45AQ9H3U1 944 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 GABBR1Q9UBS5 961 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 TUBE1Q9UJT0 475 aa15.22■□□□□ 0.03
PSMB4-207ENST00000495805 NOL7Q9UMY1 257 aaKnown RBP15.22■□□□□ 0.03
PSMB4-207ENST00000495805 MAFBQ9Y5Q3 323 aaPredicted RBP15.22■□□□□ 0.03
PSMB4-207ENST00000495805 LAMA2P24043 3122 aaKnown RBP15.22■□□□□ 0.03
PSMB4-207ENST00000495805 FAM205CA6NFA0 338 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 NEMFO60524 1076 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 ACTN1P12814 892 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 U2AF2P26368 475 aaKnown RBP eCLIP15.21■□□□□ 0.039e-7■□□□□ 8.5
PSMB4-207ENST00000495805 TRAPPC10P48553 1259 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 EPHB4P54760 987 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 IGBP1P78318 339 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 ADAM17P78536 824 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 CUL4AQ13619 759 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 HIC1Q14526 733 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 CALCRLQ16602 461 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 ZNF484Q5JVG2 852 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 POTEDQ86YR6 584 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 BBXQ8WY36 941 aaPredicted RBP15.21■□□□□ 0.03
PSMB4-207ENST00000495805 DHX38Q92620 1227 aaKnown RBP15.21■□□□□ 0.03
PSMB4-207ENST00000495805 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.21■□□□□ 0.033e-15■■■■■ 27.7
PSMB4-207ENST00000495805 FTOQ9C0B1 505 aaKnown RBP eCLIP15.21■□□□□ 0.03
PSMB4-207ENST00000495805 NRBP2Q9NSY0 501 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 CEP131Q9UPN4 1083 aa15.21■□□□□ 0.03
PSMB4-207ENST00000495805 COL1A2P08123 1366 aa15.21■□□□□ 0.02
PSMB4-207ENST00000495805 RSPH10B2B2RC85 870 aa15.2■□□□□ 0.02
PSMB4-207ENST00000495805 DKC1O60832 514 aaKnown RBP eCLIP15.2■□□□□ 0.02
PSMB4-207ENST00000495805 RSPH10BP0C881 870 aa15.2■□□□□ 0.02
PSMB4-207ENST00000495805 ACRP10323 421 aa15.2■□□□□ 0.02
PSMB4-207ENST00000495805 PDCP20941 246 aa15.2■□□□□ 0.02
PSMB4-207ENST00000495805 PPP2R5CQ13362 524 aa15.2■□□□□ 0.02
PSMB4-207ENST00000495805 TRIM71Q2Q1W2 868 aaKnown RBP15.2■□□□□ 0.02
PSMB4-207ENST00000495805 TMEM240Q5SV17 173 aa15.2■□□□□ 0.02
PSMB4-207ENST00000495805 C9orf50Q5SZB4 431 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms