RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 ZMYND8Q9ULU4 1186 aaPredicted RBP14.05□□□□□ -0.16
TRA2A-209ENST00000494255 PCDHA12Q9UN75 941 aa14.05□□□□□ -0.16
TRA2A-209ENST00000494255 MYH9P35579 1960 aaKnown RBP14.05□□□□□ -0.16
TRA2A-209ENST00000494255 C17orf102A2RUQ5 167 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 CD4P01730 458 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 OR52Z1P0C646 297 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 TXKP42681 527 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 TOB1P50616 345 aaPredicted RBP14.04□□□□□ -0.16
TRA2A-209ENST00000494255 PTGISQ16647 500 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 NCAPH2Q6IBW4 605 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 MTMR9Q96QG7 549 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 TMEM60Q9H2L4 133 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 RNPEPQ9H4A4 650 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 TTC12Q9H892 705 aaPredicted RBP14.04□□□□□ -0.16
TRA2A-209ENST00000494255 TRMT13Q9NUP7 481 aaKnown RBP14.04□□□□□ -0.16
TRA2A-209ENST00000494255 GABBR1Q9UBS5 961 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 VAV3Q9UKW4 847 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 TRPC6Q9Y210 931 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 MTMR6Q9Y217 621 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 PCDHB6Q9Y5E3 794 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 KAT6AQ92794 2004 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 POTEB3A0JP26 581 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 SYN1P17600 705 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 TMEM266Q2M3C6 531 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 GDF6Q6KF10 455 aaPredicted RBP14.04□□□□□ -0.16
TRA2A-209ENST00000494255 POTEBQ6S5H4 581 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 B3GNT9Q6UX72 402 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 ATP6V0A1Q93050 837 aa14.04□□□□□ -0.16
TRA2A-209ENST00000494255 ZSCAN16Q9H4T2 348 aaPredicted RBP14.04□□□□□ -0.16
TRA2A-209ENST00000494255 WDR81Q562E7 1941 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 H0YGN5 161 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 LAD1O00515 517 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 KIAA0355O15063 1070 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 RESTQ13127 1097 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 PPFIA1Q13136 1202 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 PTGDRQ13258 359 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 PLCB4Q15147 1175 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 SH3RF1Q7Z6J0 888 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 CCDC155Q8N6L0 562 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 ATP8B4Q8TF62 1192 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 FAM167AQ96KS9 214 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.03□□□□□ -0.16
TRA2A-209ENST00000494255 SETD4Q9NVD3 440 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 MAFBQ9Y5Q3 323 aaPredicted RBP14.03□□□□□ -0.16
TRA2A-209ENST00000494255 NRCAMQ92823 1304 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 IGSF9BQ9UPX0 1349 aa14.03□□□□□ -0.16
TRA2A-209ENST00000494255 TRIM43BA6NCK2 446 aa14.02□□□□□ -0.16
TRA2A-209ENST00000494255 RRN3P2A6NIE6 340 aa14.02□□□□□ -0.16
TRA2A-209ENST00000494255 EML1O00423 815 aa14.02□□□□□ -0.16
TRA2A-209ENST00000494255 HBP1O60381 514 aa14.02□□□□□ -0.16
TRA2A-209ENST00000494255 DKC1O60832 514 aaKnown RBP eCLIP14.02□□□□□ -0.16
TRA2A-209ENST00000494255 RAG1P15918 1043 aa14.02□□□□□ -0.16
TRA2A-209ENST00000494255 EPHA7Q15375 998 aa14.02□□□□□ -0.16
TRA2A-209ENST00000494255 GRIK4Q16099 956 aa14.02□□□□□ -0.16
TRA2A-209ENST00000494255 TRIM43Q96BQ3 446 aaPredicted RBP14.02□□□□□ -0.16
TRA2A-209ENST00000494255 LBHD1Q9BQE6 289 aaPredicted RBP14.02□□□□□ -0.16
TRA2A-209ENST00000494255 HIPK3Q9H422 1215 aa14.02□□□□□ -0.16
TRA2A-209ENST00000494255 TBX21Q9UL17 535 aa14.02□□□□□ -0.16
TRA2A-209ENST00000494255 BMP15O95972 392 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 CYP2C9P11712 490 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 INSRRP14616 1297 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 ZNF200P98182 395 aaPredicted RBP14.01□□□□□ -0.17
TRA2A-209ENST00000494255 SPIRE1Q08AE8 756 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 PTK7Q13308 1070 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 BFSP2Q13515 415 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 LMBR1Q8WVP7 490 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 BBXQ8WY36 941 aaPredicted RBP14.01□□□□□ -0.17
TRA2A-209ENST00000494255 RAB34Q9BZG1 259 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 NRBP2Q9NSY0 501 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 CEP131Q9UPN4 1083 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 TRIP12Q14669 1992 aaPredicted RBP14.01□□□□□ -0.17
TRA2A-209ENST00000494255 PDE4DIPQ5VU43 2346 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 P4HBP07237 508 aaKnown RBP14.01□□□□□ -0.17
TRA2A-209ENST00000494255 ZSCAN22P10073 491 aaPredicted RBP14.01□□□□□ -0.17
TRA2A-209ENST00000494255 HOXC8P31273 242 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 ANP32AP39687 249 aaKnown RBP14.01□□□□□ -0.17
TRA2A-209ENST00000494255 PRPHP41219 470 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 TECP42680 631 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 PSMC5P62195 406 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 IGBP1P78318 339 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 PRKCEQ02156 737 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 UGCGQ16739 394 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 TRMT1LQ7Z2T5 733 aaKnown RBP14.01□□□□□ -0.17
TRA2A-209ENST00000494255 C4orf32Q8N8J7 132 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 BANK1Q8NDB2 785 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 ERMNQ8TAM6 284 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 PPP1R12CQ9BZL4 782 aa14.01□□□□□ -0.17
TRA2A-209ENST00000494255 POTEMA6NI47 508 aa14□□□□□ -0.17
TRA2A-209ENST00000494255 TREHO43280 583 aa14□□□□□ -0.17
TRA2A-209ENST00000494255 TIMP1P01033 207 aa14□□□□□ -0.17
TRA2A-209ENST00000494255 OATP04181 439 aa14□□□□□ -0.17
TRA2A-209ENST00000494255 ATP4AP20648 1035 aa14□□□□□ -0.17
TRA2A-209ENST00000494255 QARSP47897 775 aaKnown RBP14□□□□□ -0.17
TRA2A-209ENST00000494255 ATP2C1P98194 919 aaPredicted RBP14□□□□□ -0.17
TRA2A-209ENST00000494255 HIC1Q14526 733 aa14□□□□□ -0.17
TRA2A-209ENST00000494255 ZNF484Q5JVG2 852 aa14□□□□□ -0.17
TRA2A-209ENST00000494255 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
TRA2A-209ENST00000494255 RETREG2Q8NC44 543 aa14□□□□□ -0.17
TRA2A-209ENST00000494255 CAGE1Q8TC20 777 aa14□□□□□ -0.17
TRA2A-209ENST00000494255 NEK9Q8TD19 979 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms