RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 MSH4O15457 936 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 TREHO43280 583 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 JAK2O60674 1132 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 DTNBO60941 627 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 CAND2O75155 1236 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 PSAPP07602 524 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 CYP3A7P24462 503 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 HOXC8P31273 242 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 KRT2P35908 639 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 THPOP40225 353 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 PPFIA1Q13136 1202 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 HIC1Q14526 733 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 SAFBQ15424 915 aaKnown RBP eCLIP7.9□□□□□ -1.14
TOP3A-207ENST00000493648 NPY5RQ15761 445 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 GRIK4Q16099 956 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 INF2Q27J81 1249 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 LETM2Q2VYF4 491 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 SWSAP1Q6NVH7 229 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 MOXD1Q6UVY6 613 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 ABHD15Q6UXT9 468 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 LRRC8DQ7L1W4 858 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 OTOP2Q7RTS6 562 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 NEK8Q86SG6 692 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 RSPH3Q86UC2 560 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 CCDC83Q8IWF9 413 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 SMAP1Q8IYB5 467 aaPredicted RBP7.9□□□□□ -1.14
TOP3A-207ENST00000493648 DHX38Q92620 1227 aaKnown RBP7.9□□□□□ -1.14
TOP3A-207ENST00000493648 UIMC1Q96RL1 719 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 CTAGE1Q96RT6 745 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 PCYT2Q99447 389 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 TEKT3Q9BXF9 490 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 ZNF302Q9NR11 478 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 GJB4Q9NTQ9 266 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 TRPC6Q9Y210 931 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 SAMM50Q9Y512 469 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 PCDHA10Q9Y5I2 948 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 GTF3C3Q9Y5Q9 886 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 SLC4A7Q9Y6M7 1214 aa7.9□□□□□ -1.14
TOP3A-207ENST00000493648 IGKV6D-21A0A0A0MT36 114 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 POTEB3A0JP26 581 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 ZBBXA8MT70 800 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 RSPH10B2B2RC85 870 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 EDIL3O43854 480 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 MARCH6O60337 910 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 HBP1O60381 514 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 CCNT1O60563 726 aaKnown RBP7.89□□□□□ -1.15
TOP3A-207ENST00000493648 GAS7O60861 476 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 SLC34A2O95436 690 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 TDP2O95551 362 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 CCNE2O96020 404 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 MMP1P03956 469 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 RPLP2P05387 115 aaKnown RBP7.89□□□□□ -1.15
TOP3A-207ENST00000493648 RSPH10BP0C881 870 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 INSRRP14616 1297 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 GCFC2P16383 781 aaKnown RBP7.89□□□□□ -1.15
TOP3A-207ENST00000493648 SFNP31947 248 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 MCM2P49736 904 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 JAK3P52333 1124 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 ADAM17P78536 824 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 HMGN5P82970 282 aaKnown RBP7.89□□□□□ -1.15
TOP3A-207ENST00000493648 PLCB4Q15147 1175 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 TRIM71Q2Q1W2 868 aaKnown RBP7.89□□□□□ -1.15
TOP3A-207ENST00000493648 ZNF618Q5T7W0 954 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 RASIP1Q5U651 963 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 LRCH2Q5VUJ6 765 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 KRT40Q6A162 431 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 PPP4R3AQ6IN85 833 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 TAF2Q6P1X5 1199 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 PDXDC2PQ6P474 469 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 POTEBQ6S5H4 581 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 PIK3AP1Q6ZUJ8 805 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 CKAP2LQ8IYA6 745 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 FAM184AQ8NB25 1140 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 OXER1Q8TDS5 423 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 LMBR1Q8WVP7 490 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 SLC5A5Q92911 643 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 LENG9Q96B70 501 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 C8orf76Q96K31 380 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 TBC1D32Q96NH3 1257 aa7.89□□□□□ -1.15
TOP3A-207ENST00000493648 DDX25Q9UHL0 483 aaKnown RBP7.89□□□□□ -1.15
TOP3A-207ENST00000493648 SCN5AQ14524 2016 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 MYH9P35579 1960 aaKnown RBP7.88□□□□□ -1.15
TOP3A-207ENST00000493648 ABHD14A-ACY1A0A1B0GW23 586 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 WDR64B1ANS9 1081 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 BTBD18B2RXH4 712 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 PSMD10O75832 226 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 BAIAP3O94812 1187 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 BAG4O95429 457 aaKnown RBP7.88□□□□□ -1.15
TOP3A-207ENST00000493648 KCNJ6P48051 423 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 FOSBP53539 338 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 IGBP1P78318 339 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 ST3GAL1Q11201 340 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 NR5A1Q13285 461 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 IKBKEQ14164 716 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 ZNF484Q5JVG2 852 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 ZNF697Q5TEC3 545 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 FAM109BQ6ICB4 259 aaPredicted RBP7.88□□□□□ -1.15
TOP3A-207ENST00000493648 CNKSR3Q6P9H4 555 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 RPAINQ86UA6 219 aa7.88□□□□□ -1.15
TOP3A-207ENST00000493648 CCDC60Q8IWA6 550 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms