RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 TELO2Q9Y4R8 837 aa13.98□□□□□ -0.17
GPNMB-214ENST00000492858 TTC3P53804 2025 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 A0A0D9SFI3 127 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 TRIM6-TRIM34B2RNG4 842 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 PPP1R11O60927 126 aaPredicted RBP13.97□□□□□ -0.17
GPNMB-214ENST00000492858 CD52P31358 61 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 GATMP50440 423 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 GNPTABQ3T906 1256 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 FCHSD1Q86WN1 690 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 IQCA1Q86XH1 822 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 CRIPAKQ8N1N5 446 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 DNAJB3Q8WWF6 145 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 APOL5Q9BWW9 433 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 AGO3Q9H9G7 860 aaKnown RBP13.97□□□□□ -0.17
GPNMB-214ENST00000492858 TSHZ2Q9NRE2 1034 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 PCDHA1Q9Y5I3 950 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 CDY2AQ9Y6F7 541 aa13.97□□□□□ -0.17
GPNMB-214ENST00000492858 FSD2A1L4K1 749 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 GCOM1H8Y6P7 765 aaPredicted RBP13.96□□□□□ -0.17
GPNMB-214ENST00000492858 POLR2MP0CAP2 368 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 STAG3L1P0CL83 205 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 PPFIA1Q13136 1202 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 SEMA3FQ13275 785 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 MTMR3Q13615 1198 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 DUSP6Q16828 381 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 MCMDC2Q4G0Z9 681 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 CCDC178Q5BJE1 867 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 MCTP2Q6DN12 878 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 RTN4RL1Q86UN2 441 aaPredicted RBP13.96□□□□□ -0.17
GPNMB-214ENST00000492858 ZNF589Q86UQ0 364 aaPredicted RBP13.96□□□□□ -0.17
GPNMB-214ENST00000492858 UBALD2Q8IYN6 164 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 EVI5LQ96CN4 794 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 CDCA3Q99618 268 aaPredicted RBP13.96□□□□□ -0.17
GPNMB-214ENST00000492858 S1PR5Q9H228 398 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 TUBE1Q9UJT0 475 aa13.96□□□□□ -0.17
GPNMB-214ENST00000492858 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 BRD1O95696 1058 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 SRGAP2BP0DMP2 458 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 IBSPP21815 317 aaPredicted RBP13.95□□□□□ -0.18
GPNMB-214ENST00000492858 TECP42680 631 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 MRPS6P82932 125 aaKnown RBP13.95□□□□□ -0.18
GPNMB-214ENST00000492858 MRPS9P82933 396 aaKnown RBP13.95□□□□□ -0.18
GPNMB-214ENST00000492858 UBE3AQ05086 875 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 SPOUT1Q5T280 376 aaKnown RBP13.95□□□□□ -0.18
GPNMB-214ENST00000492858 STAG2Q8N3U4 1231 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 SAMD3Q8N6K7 520 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 ENAHQ8N8S7 591 aaPredicted RBP13.95□□□□□ -0.18
GPNMB-214ENST00000492858 INPP4AQ96PE3 977 aaPredicted RBP13.95□□□□□ -0.18
GPNMB-214ENST00000492858 FTHL17Q9BXU8 183 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 RTEL1Q9NZ71 1219 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 LRFN2Q9ULH4 789 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 SORCS3Q9UPU3 1222 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 NR2E1Q9Y466 385 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 PCDHB12Q9Y5F1 795 aa13.95□□□□□ -0.18
GPNMB-214ENST00000492858 ZNF292O60281 2723 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 ZBTB5O15062 677 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 FIBPO43427 364 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 SCG2P13521 617 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 MARK3P27448 753 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 ERVFC1P60507 584 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 GRIK4Q16099 956 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 ASTLQ6HA08 431 aaPredicted RBP13.94□□□□□ -0.18
GPNMB-214ENST00000492858 ANKRD54Q6NXT1 300 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 LLGL2Q6P1M3 1020 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 SYCE2Q6PIF2 218 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 MTMR8Q96EF0 704 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 ZSCAN10Q96SZ4 725 aaPredicted RBP13.94□□□□□ -0.18
GPNMB-214ENST00000492858 SMOC2Q9H3U7 446 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 KIAA1671Q9BY89 1806 aa13.94□□□□□ -0.18
GPNMB-214ENST00000492858 MED19A0JLT2 244 aaPredicted RBP13.93□□□□□ -0.18
GPNMB-214ENST00000492858 B4E1Z4 1266 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 KLRF2D3W0D1 207 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 STAM2O75886 525 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 FGF18O76093 207 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 IGBP1P78318 339 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 KCNC3Q14003 757 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 PLPP4Q5VZY2 271 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 TMEM184AQ6ZMB5 413 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 HOMER1Q86YM7 354 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 ZBTB10Q96DT7 871 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 FAM49AQ9H0Q0 323 aaPredicted RBP13.93□□□□□ -0.18
GPNMB-214ENST00000492858 MFSD1Q9H3U5 465 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 AAASQ9NRG9 546 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 CDH22Q9UJ99 828 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 PADI3Q9ULW8 664 aa13.93□□□□□ -0.18
GPNMB-214ENST00000492858 MYH6P13533 1939 aa13.92□□□□□ -0.18
GPNMB-214ENST00000492858 MBLAC1A4D2B0 266 aaPredicted RBP13.92□□□□□ -0.18
GPNMB-214ENST00000492858 C2CD4DB7Z1M9 353 aa13.92□□□□□ -0.18
GPNMB-214ENST00000492858 ZNF213O14771 459 aa13.92□□□□□ -0.18
GPNMB-214ENST00000492858 TCF7P36402 384 aaPredicted RBP13.92□□□□□ -0.18
GPNMB-214ENST00000492858 APOBRQ0VD83 1088 aa13.92□□□□□ -0.18
GPNMB-214ENST00000492858 PAK2Q13177 524 aa13.92□□□□□ -0.18
GPNMB-214ENST00000492858 NMIQ13287 307 aaPredicted RBP13.92□□□□□ -0.18
GPNMB-214ENST00000492858 MARCH8Q5T0T0 291 aa13.92□□□□□ -0.18
GPNMB-214ENST00000492858 IER5Q5VY09 327 aa13.92□□□□□ -0.18
GPNMB-214ENST00000492858 PDE12Q6L8Q7 609 aaKnown RBP13.92□□□□□ -0.18
GPNMB-214ENST00000492858 THNSL1Q8IYQ7 743 aa13.92□□□□□ -0.18
GPNMB-214ENST00000492858 SENP7Q9BQF6 1050 aa13.92□□□□□ -0.18
GPNMB-214ENST00000492858 TMEM260Q9NX78 707 aa13.92□□□□□ -0.18
GPNMB-214ENST00000492858 TRPV2Q9Y5S1 764 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms