RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 STYK1Q6J9G0 422 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 PGM2L1Q6PCE3 622 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 TMEM130Q8N3G9 435 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 ZNF655Q8N720 491 aaPredicted RBP3.84□□□□□ -1.79
SNX13-209ENST00000492626 ASPSCR1Q9BZE9 553 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 PRDM11Q9NQV5 511 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 ATG3Q9NT62 314 aa3.84□□□□□ -1.79
SNX13-209ENST00000492626 A0A1W2PQ27 194 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 A0A1W2PQ64 194 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 A0A1W2PQC6 194 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 A0A1W2PQD8 194 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 F8W735 103 aaPredicted RBP3.84□□□□□ -1.8
SNX13-209ENST00000492626 NEMP1O14524 444 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 TBX1O43435 398 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 XPOTO43592 962 aaKnown RBP3.84□□□□□ -1.8
SNX13-209ENST00000492626 SLITRK5O94991 958 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 BMP3P12645 472 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 MCL1Q07820 350 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 LAPTM5Q13571 262 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 UBE3DQ7Z6J8 389 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 MFSD4AQ8N468 514 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 DAGLBQ8NCG7 672 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 MENTQ9BUN1 341 aa3.84□□□□□ -1.8
SNX13-209ENST00000492626 FAM126AQ9BYI3 521 aaPredicted RBP3.84□□□□□ -1.8
SNX13-209ENST00000492626 DHX15O43143 795 aaKnown RBP3.83□□□□□ -1.8
SNX13-209ENST00000492626 LSSP48449 732 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 TGFB2P61812 414 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 PICALMQ13492 652 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 DDB1Q16531 1140 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 DUSP27Q5VZP5 1158 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 CRTC3Q6UUV7 619 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 NXPE1Q8N323 547 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 CDADC1Q9BWV3 514 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 COA3Q9Y2R0 106 aaPredicted RBP3.83□□□□□ -1.8
SNX13-209ENST00000492626 GIT1Q9Y2X7 761 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 TTBK1Q5TCY1 1321 aaPredicted RBP3.83□□□□□ -1.8
SNX13-209ENST00000492626 A0A1W2PQJ5 194 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 CBX4O00257 560 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 FOXN1O15353 648 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 NPHS1O60500 1241 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 PRAMEF1O95521 474 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 SCG5P05408 212 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 GNALP38405 381 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 RPL11P62913 178 aaKnown RBP3.83□□□□□ -1.8
SNX13-209ENST00000492626 CDK5R2Q13319 367 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 SNW1Q13573 536 aaKnown RBP3.83□□□□□ -1.8
SNX13-209ENST00000492626 PRSS53Q2L4Q9 553 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 CXorf57Q6NSI4 855 aaKnown RBP3.83□□□□□ -1.8
SNX13-209ENST00000492626 TMC3Q7Z5M5 1100 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 USP33Q8TEY7 942 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 COG1Q8WTW3 980 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 JPH3Q8WXH2 748 aaPredicted RBP3.83□□□□□ -1.8
SNX13-209ENST00000492626 CLEC1BQ9P126 229 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 NOC2LQ9Y3T9 749 aaKnown RBP3.83□□□□□ -1.8
SNX13-209ENST00000492626 ST14Q9Y5Y6 855 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 TAF1LQ8IZX4 1826 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 AURKAO14965 403 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 MT-CO1P00395 513 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 DGKGP49619 791 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 SLC35F1Q5T1Q4 408 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 ACBD5Q5T8D3 534 aaPredicted RBP3.83□□□□□ -1.8
SNX13-209ENST00000492626 KCNT2Q6UVM3 1135 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 P2RX7Q99572 595 aaKnown RBP3.83□□□□□ -1.8
SNX13-209ENST00000492626 BOCQ9BWV1 1114 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 CCDC8Q9H0W5 538 aaPredicted RBP3.83□□□□□ -1.8
SNX13-209ENST00000492626 SEMA6CQ9H3T2 930 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 BTG4Q9NY30 223 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 PCDHA2Q9Y5H9 948 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 MYOM3Q5VTT5 1437 aa3.83□□□□□ -1.8
SNX13-209ENST00000492626 IL33O95760 270 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 THBDP07204 575 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 SYPP08247 313 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 C6orf222P0C671 652 aaPredicted RBP3.82□□□□□ -1.8
SNX13-209ENST00000492626 GNAT1P11488 350 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 RECQLP46063 649 aaPredicted RBP3.82□□□□□ -1.8
SNX13-209ENST00000492626 ACAP2Q15057 778 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 SF1Q15637 639 aaKnown RBP3.82□□□□□ -1.8
SNX13-209ENST00000492626 HSP90AB4PQ58FF6 505 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 CISD2Q8N5K1 135 aaKnown RBP3.82□□□□□ -1.8
SNX13-209ENST00000492626 SCLYQ96I15 445 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 CDH19Q9H159 772 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 GSX1Q9H4S2 264 aaPredicted RBP3.82□□□□□ -1.8
SNX13-209ENST00000492626 ANKRD6Q9Y2G4 727 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 FAM229AH3BQW9 127 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 SOD2P04179 222 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 FAM87AP0C7U9 286 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 SPATA31C1P0DKV0 1188 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 SPIRE1Q08AE8 756 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 LONRF3Q496Y0 759 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 MINDY4Q4G0A6 757 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 ARHGAP29Q52LW3 1261 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 SGO2Q562F6 1265 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 ZNF787Q6DD87 383 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 C1orf229Q6ZS94 237 aaPredicted RBP3.82□□□□□ -1.8
SNX13-209ENST00000492626 BEND7Q8N7W2 519 aaPredicted RBP3.82□□□□□ -1.8
SNX13-209ENST00000492626 DTWD2Q8NBA8 298 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 PPP1R13LQ8WUF5 828 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 TBC1D32Q96NH3 1257 aa3.82□□□□□ -1.8
SNX13-209ENST00000492626 CELF4Q9BZC1 486 aaKnown RBP3.82□□□□□ -1.8
SNX13-209ENST00000492626 SLC12A8A0AV02 714 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms