RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 NGRNQ9NPE2 291 aaKnown RBP6.38□□□□□ -1.39
SEC13-219ENST00000492602 ATP8A2Q9NTI2 1148 aa6.38□□□□□ -1.39
SEC13-219ENST00000492602 PRR12Q9ULL5 1215 aa6.38□□□□□ -1.39
SEC13-219ENST00000492602 ZNF532Q9HCE3 1301 aa6.38□□□□□ -1.39
SEC13-219ENST00000492602 LCTP09848 1927 aa6.38□□□□□ -1.39
SEC13-219ENST00000492602 LOC400499M0QZD8 3231 aa6.38□□□□□ -1.39
SEC13-219ENST00000492602 KIAA1671Q9BY89 1806 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 TM4SF5O14894 197 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 SORBS3O60504 671 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 TTLL1O95922 423 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 CHRNA1P02708 482 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 ICAM1P05362 532 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 SMIM10L2AP0DMW4 78 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 SMIM10L2BP0DMW5 78 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 SRFP11831 508 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 PDE6AP16499 860 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 MCCP23508 829 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 RPS6P62753 249 aaKnown RBP6.37□□□□□ -1.39
SEC13-219ENST00000492602 LAMC2Q13753 1193 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 LPIN1Q14693 890 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 PTPN14Q15678 1187 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 AASDHQ4L235 1098 aaPredicted RBP6.37□□□□□ -1.39
SEC13-219ENST00000492602 FAM26DQ5JW98 314 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 PSAPL1Q6NUJ1 521 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 TMC5Q6UXY8 1006 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 KCTD1Q719H9 257 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 SLC44A3Q8N4M1 653 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 DNERQ8NFT8 737 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 PPTC7Q8NI37 304 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 FEZF2Q8TBJ5 459 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 LINC01599Q8WXQ3 324 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 MRPS27Q92552 414 aaKnown RBP6.37□□□□□ -1.39
SEC13-219ENST00000492602 GATA6Q92908 595 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 MAP4K1Q92918 833 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 CEP95Q96GE4 821 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 BBC3Q96PG8 261 aaPredicted RBP6.37□□□□□ -1.39
SEC13-219ENST00000492602 CCDC8Q9H0W5 538 aaPredicted RBP6.37□□□□□ -1.39
SEC13-219ENST00000492602 EHMT1Q9H9B1 1298 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 TLR7Q9NYK1 1049 aaKnown RBP6.37□□□□□ -1.39
SEC13-219ENST00000492602 DBNLQ9UJU6 430 aaKnown RBP6.37□□□□□ -1.39
SEC13-219ENST00000492602 DDX41Q9UJV9 622 aaKnown RBP6.37□□□□□ -1.39
SEC13-219ENST00000492602 LRFN2Q9ULH4 789 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 NBEAQ8NFP9 2946 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 TTC3P53804 2025 aa6.37□□□□□ -1.39
SEC13-219ENST00000492602 DSPP15924 2871 aaKnown RBP6.36□□□□□ -1.39
SEC13-219ENST00000492602 IGKV6D-41A0A0C4DH26 115 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 FOXD2O60548 495 aaPredicted RBP6.36□□□□□ -1.39
SEC13-219ENST00000492602 CLASP2O75122 1294 aaKnown RBP6.36□□□□□ -1.39
SEC13-219ENST00000492602 PPFIA4O75335 1185 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 MBD4O95243 580 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 TOP3BO95985 862 aaKnown RBP6.36□□□□□ -1.39
SEC13-219ENST00000492602 HOXD8P13378 290 aaPredicted RBP6.36□□□□□ -1.39
SEC13-219ENST00000492602 RASA1P20936 1047 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 RARSP54136 660 aaKnown RBP6.36□□□□□ -1.39
SEC13-219ENST00000492602 OS9Q13438 667 aaPredicted RBP6.36□□□□□ -1.39
SEC13-219ENST00000492602 MTX1Q13505 466 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 CCDC6Q16204 474 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 CTR9Q6PD62 1173 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 RTN4RL1Q86UN2 441 aaPredicted RBP6.36□□□□□ -1.39
SEC13-219ENST00000492602 COLGALT1Q8NBJ5 622 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 SSH1Q8WYL5 1049 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 NELL1Q92832 810 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 EMID1Q96A84 441 aaPredicted RBP6.36□□□□□ -1.39
SEC13-219ENST00000492602 SHDQ96IW2 340 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 MYL10Q9BUA6 226 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 MRS2Q9HD23 443 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 SMC4Q9NTJ3 1288 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 SETD4Q9NVD3 440 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 DZANK1Q9NVP4 752 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 MTMR4Q9NYA4 1195 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 HCSTQ9UBK5 93 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 LZTS1Q9Y250 596 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 MRVI1Q9Y6F6 885 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 MYH7BA7E2Y1 1941 aa6.36□□□□□ -1.39
SEC13-219ENST00000492602 KANSL1LA0AUZ9 987 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 C2orf71A6NGG8 1288 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 SPDYE4A6NLX3 237 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 TBKBP1A7MCY6 615 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 H3BRB1 525 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 GNAT1P11488 350 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 SCG2P13521 617 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 HOXC8P31273 242 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 CD52P31358 61 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 GBP2P32456 591 aaPredicted RBP6.35□□□□□ -1.39
SEC13-219ENST00000492602 LIMK1P53667 647 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 STARD6P59095 220 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 PLCB3Q01970 1234 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 KRT17Q04695 432 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 SMC1AQ14683 1233 aaKnown RBP6.35□□□□□ -1.39
SEC13-219ENST00000492602 UBXN2BQ14CS0 331 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 TTF1Q15361 905 aaPredicted RBP6.35□□□□□ -1.39
SEC13-219ENST00000492602 LETM2Q2VYF4 491 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 HSDL1Q3SXM5 330 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 LARP1BQ659C4 914 aaKnown RBP6.35□□□□□ -1.39
SEC13-219ENST00000492602 RASGRP2Q7LDG7 609 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 GPR149Q86SP6 731 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 CABP7Q86V35 215 aa6.35□□□□□ -1.39
SEC13-219ENST00000492602 ZNF444Q8N0Y2 327 aaPredicted RBP6.35□□□□□ -1.39
SEC13-219ENST00000492602 CELF5Q8N6W0 485 aaKnown RBP6.35□□□□□ -1.39
SEC13-219ENST00000492602 MRPL43Q8N983 215 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms