RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 RSPH10BP0C881 870 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 GNA11P29992 359 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 AK2P54819 239 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 DEFB103AP81534 67 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 PPFIA1Q13136 1202 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 RAB30Q15771 203 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 NIPA1Q7RTP0 329 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 ALYREFQ86V81 257 aaKnown RBP13.42□□□□□ -0.26
MDC1-207ENST00000492462 TRIM22Q8IYM9 498 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 SDF4Q9BRK5 362 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 PRDM12Q9H4Q4 367 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 MUC6Q6W4X9 2439 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 EMSYQ7Z589 1322 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 WDR81Q562E7 1941 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 MICAL3Q7RTP6 2002 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 LARGE1O95461 756 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 CTDNEP1O95476 244 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 NLRP5P59047 1200 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 ANAPC15P60006 121 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 WDR5P61964 334 aaKnown RBP13.41□□□□□ -0.26
MDC1-207ENST00000492462 IGBP1P78318 339 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 NPY5RQ15761 445 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 GRIK4Q16099 956 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 MARCH8Q5T0T0 291 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 CNKSR3Q6P9H4 555 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 HERC6Q8IVU3 1022 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 CCDC148Q8NFR7 591 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 TRAPPC12Q8WVT3 735 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 LENG9Q96B70 501 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 IL17RAQ96F46 866 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 SMARCAD1Q9H4L7 1026 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 SH3GLB2Q9NR46 395 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 GJB4Q9NTQ9 266 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 ERAP1Q9NZ08 941 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 PCDHA11Q9Y5I1 949 aa13.41□□□□□ -0.26
MDC1-207ENST00000492462 NRCAMQ92823 1304 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 IPO5O00410 1097 aaKnown RBP13.4□□□□□ -0.26
MDC1-207ENST00000492462 PFKFB2O60825 505 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 BAIAP3O94812 1187 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 ATG7O95352 703 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 DEXIO95424 95 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 CA3P07451 260 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 GNAT1P11488 350 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 INSRRP14616 1297 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 PLCB4Q15147 1175 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 PRR16Q569H4 304 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 SPRED2Q7Z698 418 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 NECAB1Q8N987 351 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 DBF4BQ8NFT6 615 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 BICD2Q8TD16 824 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 GJA10Q969M2 543 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 SLC9A7Q96T83 725 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 C1QTNF1Q9BXJ1 281 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 SLKQ9H2G2 1235 aaPredicted RBP13.4□□□□□ -0.26
MDC1-207ENST00000492462 SLC28A3Q9HAS3 691 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 PCDHA4Q9UN74 947 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 KCNJ14Q9UNX9 436 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 TRANK1O15050 2925 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 LOXHD1Q8IVV2 1947 aa13.4□□□□□ -0.26
MDC1-207ENST00000492462 MYH9P35579 1960 aaKnown RBP13.4□□□□□ -0.27
MDC1-207ENST00000492462 IGKV6D-21A0A0A0MT36 114 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 LCHNA4D1U4 455 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 M0R2N6 131 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 PARNO95453 639 aaKnown RBP13.39□□□□□ -0.27
MDC1-207ENST00000492462 CHRNA1P02708 482 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 CIITAP33076 1130 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 STAT5BP51692 787 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
MDC1-207ENST00000492462 ADGRE1Q14246 886 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 ME3Q16798 604 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 PPP2R2DQ66LE6 453 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 MCTP2Q6DN12 878 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 ABHD15Q6UXT9 468 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
MDC1-207ENST00000492462 CCDC60Q8IWA6 550 aaPredicted RBP13.39□□□□□ -0.27
MDC1-207ENST00000492462 PHOSPHO2Q8TCD6 241 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 DNAJB3Q8WWF6 145 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 ZNF577Q9BSK1 485 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 AZI2Q9H6S1 392 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 TUBE1Q9UJT0 475 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 TRPC6Q9Y210 931 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 EVPLQ92817 2033 aa13.39□□□□□ -0.27
MDC1-207ENST00000492462 MBLAC1A4D2B0 266 aaPredicted RBP13.38□□□□□ -0.27
MDC1-207ENST00000492462 RFXAPO00287 272 aa13.38□□□□□ -0.27
MDC1-207ENST00000492462 ATP4AP20648 1035 aa13.38□□□□□ -0.27
MDC1-207ENST00000492462 KCNJ6P48051 423 aa13.38□□□□□ -0.27
MDC1-207ENST00000492462 PLEKHG4Q58EX7 1191 aa13.38□□□□□ -0.27
MDC1-207ENST00000492462 FAM26DQ5JW98 314 aa13.38□□□□□ -0.27
MDC1-207ENST00000492462 FAM117BQ6P1L5 589 aa13.38□□□□□ -0.27
MDC1-207ENST00000492462 CPLX2Q6PUV4 134 aaKnown RBP13.38□□□□□ -0.27
MDC1-207ENST00000492462 PLPPR4Q7Z2D5 763 aa13.38□□□□□ -0.27
MDC1-207ENST00000492462 BLIDQ8IZY5 108 aa13.38□□□□□ -0.27
MDC1-207ENST00000492462 USP38Q8NB14 1042 aa13.38□□□□□ -0.27
MDC1-207ENST00000492462 ADAMTS19Q8TE59 1207 aa13.38□□□□□ -0.27
MDC1-207ENST00000492462 TBCKQ8TEA7 893 aa13.38□□□□□ -0.27
MDC1-207ENST00000492462 FAM49AQ9H0Q0 323 aaPredicted RBP13.38□□□□□ -0.27
MDC1-207ENST00000492462 CERS4Q9HA82 394 aa13.38□□□□□ -0.27
MDC1-207ENST00000492462 ABHD14A-ACY1A0A1B0GW23 586 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 EPOPA6NHQ4 379 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 BACH1O14867 736 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms