RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 USP17L17D6RBQ6 530 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 USP17L19D6RCP7 530 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 USP17L20D6RJB6 530 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 CALUO43852 315 aaPredicted RBP11.76□□□□□ -0.53
SNED1-211ENST00000491761 RNF40O75150 1001 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 GYS1P13807 737 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 USP17L24Q0WX57 530 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 USP17L6PQ6QN14 398 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 BICD1Q96G01 975 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 VIPAS39Q9H9C1 493 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 PSD3Q9NYI0 1048 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 ZBTB21Q9ULJ3 1066 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 MYH13Q9UKX3 1938 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 EEF2P13639 858 aaKnown RBP11.76□□□□□ -0.53
SNED1-211ENST00000491761 SLC51AQ86UW1 340 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 TRAF1Q13077 416 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 ZYXQ15942 572 aaKnown RBP11.76□□□□□ -0.53
SNED1-211ENST00000491761 AMNQ9BXJ7 453 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 PKD2L1Q9P0L9 805 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 ARMCX3Q9UH62 379 aaPredicted RBP11.76□□□□□ -0.53
SNED1-211ENST00000491761 RRP15Q9Y3B9 282 aaKnown RBP11.76□□□□□ -0.53
SNED1-211ENST00000491761 TAF1P21675 1872 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 NEBLO76041 1014 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 MYCP01106 439 aaPredicted RBP11.75□□□□□ -0.53
SNED1-211ENST00000491761 PEX19P40855 299 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 GFPT1Q06210 699 aaPredicted RBP11.75□□□□□ -0.53
SNED1-211ENST00000491761 CDC37Q16543 378 aaPredicted RBP11.75□□□□□ -0.53
SNED1-211ENST00000491761 QRICH1Q2TAL8 776 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 KRT71Q3SY84 523 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 USH1GQ495M9 461 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 FAM83BQ5T0W9 1011 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 HS2ST1Q7LGA3 356 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 IFT20Q8IY31 132 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 OSBPL9Q96SU4 736 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 NUDT12Q9BQG2 462 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 TTYH3Q9C0H2 523 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 ARHGAP20Q9P2F6 1191 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 POTEB3A0JP26 581 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 POTECB2RU33 542 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 NR2F2P24468 414 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 MAP2K2P36507 400 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 TNNC1P63316 161 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 ICA1Q05084 483 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 NAA35Q5VZE5 725 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 POTEBQ6S5H4 581 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 GSTA5Q7RTV2 222 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 FBXO11Q86XK2 927 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 RNF10Q8N5U6 811 aaKnown RBP11.75□□□□□ -0.53
SNED1-211ENST00000491761 DHX36Q9H2U1 1008 aaKnown RBP11.75□□□□□ -0.53
SNED1-211ENST00000491761 SAMD15Q9P1V8 674 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 SSU72P8A0A1W2PR75 194 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 N4BP1O75113 896 aaKnown RBP11.75□□□□□ -0.53
SNED1-211ENST00000491761 FOSP01100 380 aaPredicted RBP11.75□□□□□ -0.53
SNED1-211ENST00000491761 EPB41P11171 864 aaKnown RBP11.75□□□□□ -0.53
SNED1-211ENST00000491761 USP11P51784 963 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 TMEM119Q4V9L6 283 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 PPP4R3CPQ6ZMV5 832 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 DAAM2Q86T65 1068 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 AMIGO3Q86WK7 504 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 KIAA0825Q8IV33 1275 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 CCDC50Q8IVM0 306 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 MSL3Q8N5Y2 521 aaKnown RBP11.75□□□□□ -0.53
SNED1-211ENST00000491761 LRRC15Q8TF66 581 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 COG1Q8WTW3 980 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 DCAF4Q8WV16 495 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 TBC1D5Q92609 795 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 TCHPQ9BT92 498 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 IRS2Q9Y4H2 1338 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 LAMB2P55268 1798 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 RCCD1A6NED2 376 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 FAM13AO94988 1023 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 PABPC4Q13310 644 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNED1-211ENST00000491761 AP3B2Q13367 1082 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 CRY2Q49AN0 593 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 MAEAQ7L5Y9 396 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 PPP1R14CQ8TAE6 165 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 GJA10Q969M2 543 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 RNF14Q9UBS8 474 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 SIK3Q9Y2K2 1263 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 ATP6V0A2Q9Y487 856 aa11.75□□□□□ -0.53
SNED1-211ENST00000491761 COL4A1P02462 1669 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 E2F5Q15329 346 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 CEP85LQ5SZL2 805 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 NFRKBQ6P4R8 1299 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 CCNI2Q6ZMN8 369 aaPredicted RBP11.74□□□□□ -0.53
SNED1-211ENST00000491761 MICAL1Q8TDZ2 1067 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 STK38LQ9Y2H1 464 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 SNED1Q8TER0 1413 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 RPSAP08865 295 aaKnown RBP11.74□□□□□ -0.53
SNED1-211ENST00000491761 XRCC5P13010 732 aaKnown RBP11.74□□□□□ -0.53
SNED1-211ENST00000491761 SP4Q02446 784 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 CDC42EP5Q6NZY7 148 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 BANK1Q8NDB2 785 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 SPATA4Q8NEY3 305 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 PSMD1Q99460 953 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 UBXN6Q9BZV1 441 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 POLD4Q9HCU8 107 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 PI4KBQ9UBF8 816 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 LRRIQ3A6PVS8 624 aaPredicted RBP11.74□□□□□ -0.53
SNED1-211ENST00000491761 HOXA10P31260 410 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms