RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 CIR1Q86X95 450 aaPredicted RBP2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 MCF2L2Q86YR7 1114 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 ZC3H7AQ8IWR0 971 aaKnown RBP2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 PALM2Q8IXS6 379 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 CELF2-AS1Q8N7Q2 184 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 STPG3Q8N7X2 389 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 KREMEN2Q8NCW0 462 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 PHOSPHO1Q8TCT1 267 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 CLEC4DQ8WXI8 215 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 LRRC37BQ96QE4 947 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 TACO1Q9BSH4 297 aaKnown RBP2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 CARD11Q9BXL7 1154 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 TANGO6Q9C0B7 1094 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 SLC6A20Q9NP91 592 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 GPR27Q9NS67 375 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 RBPJLQ9UBG7 517 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 FBXL7Q9UJT9 491 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 RCAN3Q9UKA8 241 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 ZNF652Q9Y2D9 606 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 GRIN2BQ13224 1484 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 BRD4O60885 1362 aaPredicted RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 INSRP06213 1382 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 LAMC3Q9Y6N6 1575 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 POLA1P09884 1462 aaPredicted RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 RPRD2Q5VT52 1461 aaKnown RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 ST20-MTHFSA0A0A6YYL1 179 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 ESYT3A0FGR9 886 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 ARNTLO00327 626 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 NKRFO15226 690 aaKnown RBP eCLIP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 DLX3O60479 287 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 TADA3O75528 432 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 LRG1P02750 347 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 LTFP02788 710 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 SCG5P05408 212 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 PFKPQ01813 784 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 SSRP1Q08945 709 aaKnown RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 MAP4K2Q12851 820 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 CRY1Q16526 586 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 SKIDA1Q1XH10 827 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 WDR72Q3MJ13 1102 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 PAN2Q504Q3 1202 aaKnown RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 CPZQ66K79 652 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 MRM1Q6IN84 353 aaKnown RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 DENND5AQ6IQ26 1287 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 DPP8Q6V1X1 898 aaPredicted RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 LBX2Q6XYB7 198 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 RALYLQ86SE5 291 aaKnown RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 NLRP10Q86W26 655 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 OSTM1Q86WC4 334 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 MIB1Q86YT6 1006 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 NLGN4XQ8N0W4 816 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 SGSM3Q96HU1 749 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 SAMD11Q96NU1 681 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 CDK5RAP1Q96SZ6 601 aaKnown RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 CSRNP2Q9H175 543 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 PPARGC1AQ9UBK2 798 aaKnown RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 ASH2LQ9UBL3 628 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 FAM184BQ9ULE4 1060 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 TCAF1Q9Y4C2 921 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 TRAF6Q9Y4K3 522 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 PCDHA8Q9Y5H6 950 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 ARHGEF11O15085 1522 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 UGGT2Q9NYU1 1516 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 MYBBP1AQ9BQG0 1328 aaKnown RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 THOC2Q8NI27 1593 aaKnown RBP2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 ANKRD30AQ9BXX3 1397 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 KIF15Q9NS87 1388 aa2.61□□□□□ -1.99
SNRNP40-207ENST00000491106 SNAPC4Q5SXM2 1469 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 EPRSP07814 1512 aaKnown RBP2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 TRBV23-1A0A0A0MS06 115 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 C9orf118A6NHY6 69 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 GOLGA8BA8MQT2 603 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 H0Y858 1186 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 MSCO60682 206 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 AMHP03971 560 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 GDF5P43026 501 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 RRADP55042 308 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 GPR85P60893 370 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 TMF1P82094 1093 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 ZXDAP98168 799 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 DLX2Q07687 328 aaPredicted RBP2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 PAK1Q13153 545 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 ADAM9Q13443 819 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 SMAD2Q15796 467 aaKnown RBP2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 SLC35F1Q5T1Q4 408 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 YOD1Q5VVQ6 348 aaPredicted RBP2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 ARHGAP36Q6ZRI8 547 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 OTOP3Q7RTS5 596 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 OTOP2Q7RTS6 562 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 GPR155Q7Z3F1 870 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 SCUBE1Q8IWY4 988 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 KLHL36Q8N4N3 616 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 PMFBP1Q8TBY8 1022 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 IGDCC4Q8TDY8 1250 aa2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 ERCC4Q92889 916 aaPredicted RBP2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 DVL3Q92997 716 aaPredicted RBP2.6□□□□□ -1.99
SNRNP40-207ENST00000491106 FBXW5Q969U6 566 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms