RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 NAB2Q15742 525 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 TUBB8Q3ZCM7 444 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 SLC51AQ86UW1 340 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 EFCAB13Q8IY85 973 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 MREGQ8N565 214 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 TSEN2Q8NCE0 465 aaKnown RBP13.51□□□□□ -0.25
FXR1-220ENST00000491062 VAT1LQ9HCJ6 419 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 CD209Q9NNX6 404 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 MTMR4Q9NYA4 1195 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 PODXL2Q9NZ53 605 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 ATP6V0A2Q9Y487 856 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 PCDHGC5Q9Y5F6 944 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 ATP8B3O60423 1300 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 MYO3BQ8WXR4 1341 aa13.51□□□□□ -0.25
FXR1-220ENST00000491062 BTNL10A8MVZ5 291 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 EIF3HO15372 352 aaKnown RBP eCLIP13.5□□□□□ -0.25
FXR1-220ENST00000491062 HSF2BPO75031 334 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 ATP2B4P23634 1241 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 GABPAQ06546 454 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 CCDC40Q4G0X9 1142 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 TDRD12Q587J7 1177 aaKnown RBP13.5□□□□□ -0.25
FXR1-220ENST00000491062 FAM83BQ5T0W9 1011 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.5□□□□□ -0.25
FXR1-220ENST00000491062 SAMD7Q7Z3H4 446 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 TRIM59Q8IWR1 403 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 GLIS3Q8NEA6 775 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 COA7Q96BR5 231 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 NAP1L4Q99733 375 aaKnown RBP13.5□□□□□ -0.25
FXR1-220ENST00000491062 LSM14BQ9BX40 385 aaKnown RBP13.5□□□□□ -0.25
FXR1-220ENST00000491062 CAPS2Q9BXY5 557 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 NT5C3AQ9H0P0 336 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 EFCC1Q9HA90 598 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 SMARCAL1Q9NZC9 954 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 EHD2Q9NZN4 543 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 RTCBQ9Y3I0 505 aaKnown RBP13.5□□□□□ -0.25
FXR1-220ENST00000491062 PCDHA2Q9Y5H9 948 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 FRMPD2Q68DX3 1309 aaPredicted RBP13.5□□□□□ -0.25
FXR1-220ENST00000491062 PNMA6FA0A0J9YX94 578 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 CES2O00748 559 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 CXCR5P32302 372 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 SLC7A5Q01650 507 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 ATP2B2Q01814 1243 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 PAK2Q13177 524 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 LRRC41Q15345 812 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 SLC18A3Q16572 532 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 ECM1Q16610 540 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 IFT20Q8IY31 132 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 PPM1EQ8WY54 764 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 HAS1Q92839 578 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 ZFRQ96KR1 1074 aaKnown RBP13.5□□□□□ -0.25
FXR1-220ENST00000491062 INPP4AQ96PE3 977 aaPredicted RBP13.5□□□□□ -0.25
FXR1-220ENST00000491062 TANGO6Q9C0B7 1094 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 PANK4Q9NVE7 773 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 AIPL1Q9NZN9 384 aa13.5□□□□□ -0.25
FXR1-220ENST00000491062 DDX25Q9UHL0 483 aaKnown RBP13.5□□□□□ -0.25
FXR1-220ENST00000491062 BUB1O43683 1085 aa13.49□□□□□ -0.25
FXR1-220ENST00000491062 TNNI2P48788 182 aa13.49□□□□□ -0.25
FXR1-220ENST00000491062 GPSM2P81274 684 aa13.49□□□□□ -0.25
FXR1-220ENST00000491062 ZNF543Q08ER8 600 aa13.49□□□□□ -0.25
FXR1-220ENST00000491062 TTMPQ5BVD1 217 aa13.49□□□□□ -0.25
FXR1-220ENST00000491062 MEI1Q5TIA1 1274 aa13.49□□□□□ -0.25
FXR1-220ENST00000491062 CD302Q8IX05 232 aa13.49□□□□□ -0.25
FXR1-220ENST00000491062 CCDC65Q8IXS2 484 aa13.49□□□□□ -0.25
FXR1-220ENST00000491062 C1orf131Q8NDD1 294 aaKnown RBP13.49□□□□□ -0.25
FXR1-220ENST00000491062 TBC1D22AQ8WUA7 517 aa13.49□□□□□ -0.25
FXR1-220ENST00000491062 RUFY1Q96T51 708 aa13.49□□□□□ -0.25
FXR1-220ENST00000491062 PSMB7Q99436 277 aa13.49□□□□□ -0.25
FXR1-220ENST00000491062 GANQ9H2C0 597 aa13.49□□□□□ -0.25
FXR1-220ENST00000491062 ATXN2Q99700 1313 aaKnown RBP13.49□□□□□ -0.25
FXR1-220ENST00000491062 FRMD3A2A2Y4 597 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 TRAF5O00463 557 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 PALMO75781 387 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 MYBP10242 640 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 MATR3P43243 847 aaKnown RBP eCLIP13.48□□□□□ -0.25
FXR1-220ENST00000491062 EDRF1Q3B7T1 1238 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 ANKRD13CQ8N6S4 541 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 EIF1ADQ8N9N8 165 aaKnown RBP13.48□□□□□ -0.25
FXR1-220ENST00000491062 CUL5Q93034 780 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 GPR101Q96P66 508 aaPredicted RBP13.48□□□□□ -0.25
FXR1-220ENST00000491062 ZIM3Q96PE6 472 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 KCTD10Q9H3F6 313 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 PLEKHA4Q9H4M7 779 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 JMJD4Q9H9V9 463 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 NLRC4Q9NPP4 1024 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 SWAP70Q9UH65 585 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 MYH4Q9Y623 1939 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 A0A087WUV0 522 aaPredicted RBP13.48□□□□□ -0.25
FXR1-220ENST00000491062 PPP1R11O60927 126 aaPredicted RBP13.48□□□□□ -0.25
FXR1-220ENST00000491062 UFL1O94874 794 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 POLR2FP61218 127 aaKnown RBP13.48□□□□□ -0.25
FXR1-220ENST00000491062 GNGT1P63211 74 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 TTC31Q49AM3 519 aaPredicted RBP13.48□□□□□ -0.25
FXR1-220ENST00000491062 EMC10Q5UCC4 262 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 TMC4Q7Z404 712 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 LAPTM4BQ86VI4 370 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 AMIGO3Q86WK7 504 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 IQCKQ8N0W5 287 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 LRRC47Q8N1G4 583 aaKnown RBP13.48□□□□□ -0.25
FXR1-220ENST00000491062 CNBD1Q8NA66 436 aa13.48□□□□□ -0.25
FXR1-220ENST00000491062 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms