RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 PPFIA1Q13136 1202 aa17.27■□□□□ 0.36
COL27A1-206ENST00000490831 RAB30Q15771 203 aa17.27■□□□□ 0.36
COL27A1-206ENST00000490831 GRIK4Q16099 956 aa17.27■□□□□ 0.36
COL27A1-206ENST00000490831 PRR16Q569H4 304 aa17.27■□□□□ 0.36
COL27A1-206ENST00000490831 FAM26DQ5JW98 314 aa17.27■□□□□ 0.36
COL27A1-206ENST00000490831 MARCH8Q5T0T0 291 aa17.27■□□□□ 0.36
COL27A1-206ENST00000490831 ZNF746Q6NUN9 644 aaPredicted RBP17.27■□□□□ 0.36
COL27A1-206ENST00000490831 CNKSR3Q6P9H4 555 aa17.27■□□□□ 0.36
COL27A1-206ENST00000490831 PHOSPHO2Q8TCD6 241 aa17.27■□□□□ 0.36
COL27A1-206ENST00000490831 TBCKQ8TEA7 893 aa17.27■□□□□ 0.36
COL27A1-206ENST00000490831 TIFAQ96CG3 184 aa17.27■□□□□ 0.36
COL27A1-206ENST00000490831 MBOAT7Q96N66 472 aa17.27■□□□□ 0.36
COL27A1-206ENST00000490831 KIF2CQ99661 725 aa17.27■□□□□ 0.36
COL27A1-206ENST00000490831 RRN3P2A6NIE6 340 aa17.26■□□□□ 0.35
COL27A1-206ENST00000490831 ZBBXA8MT70 800 aa17.26■□□□□ 0.35
COL27A1-206ENST00000490831 FDPSP14324 419 aaKnown RBP17.26■□□□□ 0.35
COL27A1-206ENST00000490831 ATP2A2P16615 1042 aaKnown RBP17.26■□□□□ 0.35
COL27A1-206ENST00000490831 MARK3P27448 753 aa17.26■□□□□ 0.35
COL27A1-206ENST00000490831 PLCB4Q15147 1175 aa17.26■□□□□ 0.35
COL27A1-206ENST00000490831 Q4G0T1 1027 aa17.26■□□□□ 0.35
COL27A1-206ENST00000490831 TAF2Q6P1X5 1199 aa17.26■□□□□ 0.35
COL27A1-206ENST00000490831 MOXD1Q6UVY6 613 aa17.26■□□□□ 0.35
COL27A1-206ENST00000490831 NECAB1Q8N987 351 aa17.26■□□□□ 0.35
COL27A1-206ENST00000490831 WASF1Q92558 559 aa17.26■□□□□ 0.35
COL27A1-206ENST00000490831 TNPO1Q92973 898 aaKnown RBP17.26■□□□□ 0.35
COL27A1-206ENST00000490831 SLC9A7Q96T83 725 aa17.26■□□□□ 0.35
COL27A1-206ENST00000490831 ORC3Q9UBD5 711 aaPredicted RBP17.26■□□□□ 0.35
COL27A1-206ENST00000490831 CHD9Q3L8U1 2897 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 MSH4O15457 936 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 INSRRP14616 1297 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 XBP1P17861 261 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 KRT76Q01546 638 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
COL27A1-206ENST00000490831 TCTN1Q2MV58 587 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 MIS18BP1Q6P0N0 1132 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 KRT25Q7Z3Z0 450 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 SMAP1Q8IYB5 467 aaPredicted RBP17.25■□□□□ 0.35
COL27A1-206ENST00000490831 NSUN7Q8NE18 718 aaKnown RBP17.25■□□□□ 0.35
COL27A1-206ENST00000490831 FAM161BQ96MY7 647 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 RIT2Q99578 217 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 ZNF576Q9H609 170 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 MSRAQ9UJ68 235 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 TUBE1Q9UJT0 475 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 KCNJ14Q9UNX9 436 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 YBX2Q9Y2T7 364 aaKnown RBP17.25■□□□□ 0.35
COL27A1-206ENST00000490831 PCDHA11Q9Y5I1 949 aa17.25■□□□□ 0.35
COL27A1-206ENST00000490831 ABHD14A-ACY1A0A1B0GW23 586 aa17.24■□□□□ 0.35
COL27A1-206ENST00000490831 DDX39AO00148 427 aaKnown RBP17.24■□□□□ 0.35
COL27A1-206ENST00000490831 EFCAB14O75071 495 aa17.24■□□□□ 0.35
COL27A1-206ENST00000490831 RPLP2P05387 115 aaKnown RBP17.24■□□□□ 0.35
COL27A1-206ENST00000490831 RBM25P49756 843 aaKnown RBP17.24■□□□□ 0.35
COL27A1-206ENST00000490831 WDR5P61964 334 aaKnown RBP17.24■□□□□ 0.35
COL27A1-206ENST00000490831 ST3GAL1Q11201 340 aa17.24■□□□□ 0.35
COL27A1-206ENST00000490831 NONOQ15233 471 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL27A1-206ENST00000490831 PLEKHG4Q58EX7 1191 aa17.24■□□□□ 0.35
COL27A1-206ENST00000490831 FAM160B1Q5W0V3 765 aa17.24■□□□□ 0.35
COL27A1-206ENST00000490831 RUFY4Q6ZNE9 571 aa17.24■□□□□ 0.35
COL27A1-206ENST00000490831 CCDC60Q8IWA6 550 aaPredicted RBP17.24■□□□□ 0.35
COL27A1-206ENST00000490831 SLC5A5Q92911 643 aa17.24■□□□□ 0.35
COL27A1-206ENST00000490831 CDX2Q99626 313 aaPredicted RBP17.24■□□□□ 0.35
COL27A1-206ENST00000490831 MAFBQ9Y5Q3 323 aaPredicted RBP17.24■□□□□ 0.35
COL27A1-206ENST00000490831 GBF1Q92538 1859 aa17.24■□□□□ 0.35
COL27A1-206ENST00000490831 POTEB3A0JP26 581 aa17.23■□□□□ 0.35
COL27A1-206ENST00000490831 POTEBQ6S5H4 581 aa17.23■□□□□ 0.35
COL27A1-206ENST00000490831 ATP8B4Q8TF62 1192 aa17.23■□□□□ 0.35
COL27A1-206ENST00000490831 ZNF302Q9NR11 478 aa17.23■□□□□ 0.35
COL27A1-206ENST00000490831 GJB4Q9NTQ9 266 aa17.23■□□□□ 0.35
COL27A1-206ENST00000490831 LIMCH1Q9UPQ0 1083 aa17.23■□□□□ 0.35
COL27A1-206ENST00000490831 TRPC6Q9Y210 931 aa17.23■□□□□ 0.35
COL27A1-206ENST00000490831 PCDHA10Q9Y5I2 948 aa17.23■□□□□ 0.35
COL27A1-206ENST00000490831 BACH1O14867 736 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 HBP1O60381 514 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 DTNBO60941 627 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 PSMD10O75832 226 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 TDP2O95551 362 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 CHRNA1P02708 482 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 ATP4AP20648 1035 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 RABGGTBP53611 331 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 MGAT3Q09327 533 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 IKBKEQ14164 716 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 GRIN2CQ14957 1233 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 SWSAP1Q6NVH7 229 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 B3GNT9Q6UX72 402 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 HERC6Q8IVU3 1022 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 DBF4BQ8NFT6 615 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 UIMC1Q96RL1 719 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 NKX2-4Q9H2Z4 354 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 PCDHA2Q9Y5H9 948 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 CHD7Q9P2D1 2997 aa17.22■□□□□ 0.35
COL27A1-206ENST00000490831 PTPRSQ13332 1948 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 COL1A2P08123 1366 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 WDR64B1ANS9 1081 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 PSAPP07602 524 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 CTSHP09668 335 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 KCNJ6P48051 423 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 INF2Q27J81 1249 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 PPP4R3AQ6IN85 833 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 PDXDC2PQ6P474 469 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 RSPH3Q86UC2 560 aa17.21■□□□□ 0.35
COL27A1-206ENST00000490831 ETNPPLQ8TBG4 499 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms