RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 FANCLQ9NW38 375 aa11.43□□□□□ -0.58
HDAC3-210ENST00000490808 IFNKQ9P0W0 207 aa11.43□□□□□ -0.58
HDAC3-210ENST00000490808 ADD3Q9UEY8 706 aaKnown RBP11.43□□□□□ -0.58
HDAC3-210ENST00000490808 LOXHD1Q8IVV2 1947 aa11.43□□□□□ -0.58
HDAC3-210ENST00000490808 ZSWIM8A7E2V4 1837 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 A0A087WWV3 80 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 FAM86B1E9PN63 330 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 MEIS1O00470 390 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 EDIL3O43854 480 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 ADCY3O60266 1144 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 KRT18P05783 430 aaKnown RBP11.42□□□□□ -0.58
HDAC3-210ENST00000490808 FAM86B2P0C5J1 330 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 BMP6P22004 513 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 CTGFP29279 349 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 PPP2R5CQ13362 524 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 MCM6Q14566 821 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 ARHGEF16Q5VV41 709 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 MFSD14CQ5VZR4 134 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 KLHL10Q6JEL2 608 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 NLRX1Q86UT6 975 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 SLC17A8Q8NDX2 589 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 DNERQ8NFT8 737 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 CLEC4DQ8WXI8 215 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 CDHR1Q96JP9 859 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 PNMA5Q96PV4 448 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 TBC1D22BQ9NU19 505 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 MAGEC2Q9UBF1 373 aaPredicted RBP11.42□□□□□ -0.58
HDAC3-210ENST00000490808 KIAA1024Q9UPX6 916 aa11.42□□□□□ -0.58
HDAC3-210ENST00000490808 MCM3APO60318 1980 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 RPTORQ8N122 1335 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 SYNGAP1Q96PV0 1343 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 DNAJC25-GNG10A0A024R161 153 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 ASB14A6NK59 587 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 PPP1R3GB7ZBB8 358 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 AP5Z1O43299 807 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 MSCO60682 206 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 DKC1O60832 514 aaKnown RBP eCLIP11.41□□□□□ -0.58
HDAC3-210ENST00000490808 TPM1P09493 284 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 CCND2P30279 289 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 EPHA7Q15375 998 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 MAMDC4Q6UXC1 1216 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 NSMFQ6X4W1 530 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 ADSSL1Q8N142 457 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 CCDC150Q8NCX0 1101 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 NSUN6Q8TEA1 469 aaKnown RBP11.41□□□□□ -0.58
HDAC3-210ENST00000490808 NELFBQ8WX92 580 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 DDX12PQ92771 950 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 SLC5A5Q92911 643 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 MTRQ99707 1265 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 TSG101Q99816 390 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 XPO4Q9C0E2 1151 aaKnown RBP11.41□□□□□ -0.58
HDAC3-210ENST00000490808 A1CFQ9NQ94 594 aaKnown RBP11.41□□□□□ -0.58
HDAC3-210ENST00000490808 CTNND2Q9UQB3 1225 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 PTCH2Q9Y6C5 1203 aa11.41□□□□□ -0.58
HDAC3-210ENST00000490808 IGLV3-22A0A075B6J6 115 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 H0YGN5 161 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 POTEB2H3BUK9 544 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 IPO5O00410 1097 aaKnown RBP11.4□□□□□ -0.58
HDAC3-210ENST00000490808 NFIBO00712 420 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 KLRC4O43908 158 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 SSBP05455 408 aaKnown RBP eCLIP11.4□□□□□ -0.58
HDAC3-210ENST00000490808 PLA2G4BP0C869 781 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 IDEP14735 1019 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 CCNE1P24864 410 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 PRCPP42785 496 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 ZNF792Q3KQV3 632 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 FOXR2Q6PJQ5 311 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 CCDC186Q7Z3E2 898 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 FAM133AQ8N9E0 248 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 SYTL5Q8TDW5 730 aaPredicted RBP11.4□□□□□ -0.58
HDAC3-210ENST00000490808 TBC1D5Q92609 795 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 LENG9Q96B70 501 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 NACC1Q96RE7 527 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 RMDN3Q96TC7 470 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 THAP9Q9H5L6 903 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 JADE2Q9NQC1 790 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 HOMER2Q9NSB8 354 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 BLOC1S4Q9NUP1 217 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 CYP39A1Q9NYL5 469 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 KCND2Q9NZV8 630 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 RIPK3Q9Y572 518 aa11.4□□□□□ -0.58
HDAC3-210ENST00000490808 BRCA2P51587 3418 aa11.4□□□□□ -0.59
HDAC3-210ENST00000490808 FRMPD4Q14CM0 1322 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 ZNF500O60304 480 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-210ENST00000490808 PSMD10O75832 226 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 EYA4O95677 639 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 IGHA2P01877 340 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 ZNF18P17022 549 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 CYP2B6P20813 491 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 EEF1GP26641 437 aaKnown RBP11.39□□□□□ -0.59
HDAC3-210ENST00000490808 CASP1P29466 404 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 SFNP31947 248 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 CLCN1P35523 988 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 RPS6P62753 249 aaKnown RBP11.39□□□□□ -0.59
HDAC3-210ENST00000490808 SPIRE1Q08AE8 756 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 MTMR1Q13613 665 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 PGM5Q15124 567 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 GNPTABQ3T906 1256 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 MUM1L1Q5H9M0 696 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 CHRDL2Q6WN34 429 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms