RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PPP2R3CQ969Q6 453 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 TAAR1Q96RJ0 339 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 PLVAPQ9BX97 442 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 SMOC2Q9H3U7 446 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 COL20A1Q9P218 1284 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 GTF3C3Q9Y5Q9 886 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 TTC3P53804 2025 aa10.79□□□□□ -0.68
SSBP1-212ENST00000489378 M0R2C6 588 aa10.79□□□□□ -0.68
SSBP1-212ENST00000489378 TREHO43280 583 aa10.79□□□□□ -0.68
SSBP1-212ENST00000489378 SORBS3O60504 671 aa10.79□□□□□ -0.68
SSBP1-212ENST00000489378 HOXD8P13378 290 aaPredicted RBP10.79□□□□□ -0.68
SSBP1-212ENST00000489378 LAMC2Q13753 1193 aa10.79□□□□□ -0.68
SSBP1-212ENST00000489378 APPBP2Q92624 585 aa10.79□□□□□ -0.68
SSBP1-212ENST00000489378 ZNF689Q96CS4 500 aaPredicted RBP10.79□□□□□ -0.68
SSBP1-212ENST00000489378 MRPL42Q9Y6G3 142 aaKnown RBP10.79□□□□□ -0.68
SSBP1-212ENST00000489378 OTOGLQ3ZCN5 2332 aa10.79□□□□□ -0.68
SSBP1-212ENST00000489378 C17orf102A2RUQ5 167 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 PER2O15055 1255 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 BRD1O95696 1058 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 ARP10275 920 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 HOXC8P31273 242 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 PPARAQ07869 468 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 FTSJ3Q8IY81 847 aaKnown RBP10.78□□□□□ -0.68
SSBP1-212ENST00000489378 KLHL23Q8NBE8 558 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 SYTL5Q8TDW5 730 aaPredicted RBP10.78□□□□□ -0.68
SSBP1-212ENST00000489378 ATP8B4Q8TF62 1192 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 POF1BQ8WVV4 589 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 APBB2Q92870 758 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 P2RX5Q93086 422 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 C16orf70Q9BSU1 422 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.78□□□□□ -0.68
SSBP1-212ENST00000489378 PLXNA4Q9HCM2 1894 aa10.78□□□□□ -0.68
SSBP1-212ENST00000489378 FRYLO94915 3013 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 TSPY2A6NKD2 308 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 PATL2C9JE40 543 aaKnown RBP10.77□□□□□ -0.68
SSBP1-212ENST00000489378 ENPP3O14638 875 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 PPFIA4O75335 1185 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 DGKIO75912 1065 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 SMIM10L2AP0DMW4 78 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 SMIM10L2BP0DMW5 78 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 GNAT2P19087 354 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 NOVP48745 357 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 STXBP2Q15833 593 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 HSDL1Q3SXM5 330 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 USH1GQ495M9 461 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 KIAA2013Q8IYS2 634 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 S1PR5Q9H228 398 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 TLE6Q9H808 572 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 MRVI1Q9Y6F6 885 aa10.77□□□□□ -0.68
SSBP1-212ENST00000489378 WDR19Q8NEZ3 1342 aa10.77□□□□□ -0.69
SSBP1-212ENST00000489378 ATRXP46100 2492 aa10.77□□□□□ -0.69
SSBP1-212ENST00000489378 RNF113AO15541 343 aaKnown RBP10.76□□□□□ -0.69
SSBP1-212ENST00000489378 CAND2O75155 1236 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 SLC3A2P08195 630 aaKnown RBP10.76□□□□□ -0.69
SSBP1-212ENST00000489378 CTDSPL2Q05D32 466 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 FAM26DQ5JW98 314 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 MYSM1Q5VVJ2 828 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 PADI6Q6TGC4 694 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 UBALD2Q8IYN6 164 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 RGS22Q8NE09 1264 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 NSUN6Q8TEA1 469 aaKnown RBP10.76□□□□□ -0.69
SSBP1-212ENST00000489378 SPATA33Q96N06 139 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 IWS1Q96ST2 819 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 RMDN3Q96TC7 470 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 MTRQ99707 1265 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 APOL5Q9BWW9 433 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 RNPEPQ9H4A4 650 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 CDH22Q9UJ99 828 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 PNMA2Q9UL42 364 aa10.76□□□□□ -0.69
SSBP1-212ENST00000489378 EIF3JO75822 258 aaKnown RBP10.75□□□□□ -0.69
SSBP1-212ENST00000489378 CHRNA1P02708 482 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 GHRP10912 638 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 EIF2AK2P19525 551 aaKnown RBP10.75□□□□□ -0.69
SSBP1-212ENST00000489378 MTMR3Q13615 1198 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 PUM1Q14671 1186 aaKnown RBP eCLIP10.75□□□□□ -0.69
SSBP1-212ENST00000489378 NAALADL2Q58DX5 795 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 CELF3Q5SZQ8 465 aaKnown RBP10.75□□□□□ -0.69
SSBP1-212ENST00000489378 SIRT2Q8IXJ6 389 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 KBTBD3Q8NAB2 608 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 NEK1Q96PY6 1258 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 TMEM47Q9BQJ4 181 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 NACAP1Q9BZK3 213 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 TSHZ2Q9NRE2 1034 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 SETD4Q9NVD3 440 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 SORCS3Q9UPU3 1222 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 SUPT16HQ9Y5B9 1047 aaKnown RBP10.75□□□□□ -0.69
SSBP1-212ENST00000489378 GPR179Q6PRD1 2367 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 USP24Q9UPU5 2620 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 H3BRB1 525 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 RANBP6O60518 1105 aaKnown RBP10.75□□□□□ -0.69
SSBP1-212ENST00000489378 PPFIA3O75145 1194 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 RAB11FIP3O75154 756 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 GGPS1O95749 300 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 PDHBP11177 359 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 CLCN5P51795 746 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 DUSP6Q16828 381 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 PAN2Q504Q3 1202 aaKnown RBP10.75□□□□□ -0.69
SSBP1-212ENST00000489378 CWF19L1Q69YN2 538 aaKnown RBP10.75□□□□□ -0.69
SSBP1-212ENST00000489378 SYCE2Q6PIF2 218 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 KCNG4Q8TDN1 519 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms