RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 WDR64B1ANS9 1081 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 PITPNM1O00562 1244 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 TBX3O15119 743 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 GJB2P29033 226 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 SFNP31947 248 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 CCL23P55773 120 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 PPFIA1Q13136 1202 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 SWSAP1Q6NVH7 229 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 TDHQ8IZJ6 230 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 PCYT2Q99447 389 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 ZNF302Q9NR11 478 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 SETD4Q9NVD3 440 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 TRPC6Q9Y210 931 aa17.01■□□□□ 0.31
CXCL12-207ENST00000488591 IGKV6D-21A0A0A0MT36 114 aa17■□□□□ 0.31
CXCL12-207ENST00000488591 FAM205CA6NFA0 338 aa17■□□□□ 0.31
CXCL12-207ENST00000488591 SLC37A4O43826 429 aa17■□□□□ 0.31
CXCL12-207ENST00000488591 PSMD10O75832 226 aa17■□□□□ 0.31
CXCL12-207ENST00000488591 CSF2RAP15509 400 aa17■□□□□ 0.31
CXCL12-207ENST00000488591 JAK3P52333 1124 aa17■□□□□ 0.31
CXCL12-207ENST00000488591 ZNF200P98182 395 aaPredicted RBP17■□□□□ 0.31
CXCL12-207ENST00000488591 HABP4Q5JVS0 413 aaKnown RBP17■□□□□ 0.31
CXCL12-207ENST00000488591 PDXDC2PQ6P474 469 aa17■□□□□ 0.31
CXCL12-207ENST00000488591 CKAP2LQ8IYA6 745 aa17■□□□□ 0.31
CXCL12-207ENST00000488591 RPUSD2Q8IZ73 545 aaKnown RBP17■□□□□ 0.31
CXCL12-207ENST00000488591 ETNPPLQ8TBG4 499 aa17■□□□□ 0.31
CXCL12-207ENST00000488591 AFAP1L1Q8TED9 768 aa17■□□□□ 0.31
CXCL12-207ENST00000488591 DISC1Q9NRI5 854 aa17■□□□□ 0.31
CXCL12-207ENST00000488591 KAT6AQ92794 2004 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 UMODL1Q5DID0 1318 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 POTEB3A0JP26 581 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 RRN3P2A6NIE6 340 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 H3BQV1 296 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 CHMP2AO43633 222 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 HOXC8P31273 242 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 RFC2P35250 354 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 CUL4AQ13619 759 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 POTEBQ6S5H4 581 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 MIER3Q7Z3K6 550 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 SERINC5Q86VE9 423 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 NOSTRINQ8IVI9 506 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 SLFN12Q8IYM2 578 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 RDM1Q8NG50 284 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 GJA10Q969M2 543 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 CTAGE1Q96RT6 745 aa16.99■□□□□ 0.31
CXCL12-207ENST00000488591 NOL7Q9UMY1 257 aaKnown RBP16.99■□□□□ 0.31
CXCL12-207ENST00000488591 TREHO43280 583 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 HBP1O60381 514 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 PARNO95453 639 aaKnown RBP16.98■□□□□ 0.31
CXCL12-207ENST00000488591 ATP2B1P20020 1258 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 HIC1Q14526 733 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 PLCB4Q15147 1175 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 GRIK4Q16099 956 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 CCDC60Q8IWA6 550 aaPredicted RBP16.98■□□□□ 0.31
CXCL12-207ENST00000488591 LMBR1Q8WVP7 490 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 SCLYQ96I15 445 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 WNT8AQ9H1J5 351 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 UNC45AQ9H3U1 944 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 KCNMB3Q9NPA1 279 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 IL23AQ9NPF7 189 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 GABBR1Q9UBS5 961 aa16.98■□□□□ 0.31
CXCL12-207ENST00000488591 MAFBQ9Y5Q3 323 aaPredicted RBP16.98■□□□□ 0.31
CXCL12-207ENST00000488591 K7ELQ4 463 aaPredicted RBP16.97■□□□□ 0.31
CXCL12-207ENST00000488591 NEMFO60524 1076 aa16.97■□□□□ 0.31
CXCL12-207ENST00000488591 IQCF3P0C7M6 154 aa16.97■□□□□ 0.31
CXCL12-207ENST00000488591 CKBP12277 381 aa16.97■□□□□ 0.31
CXCL12-207ENST00000488591 INSRRP14616 1297 aa16.97■□□□□ 0.31
CXCL12-207ENST00000488591 SELPP16109 830 aa16.97■□□□□ 0.31
CXCL12-207ENST00000488591 U2AF2P26368 475 aaKnown RBP eCLIP16.97■□□□□ 0.31
CXCL12-207ENST00000488591 THPOP40225 353 aa16.97■□□□□ 0.31
CXCL12-207ENST00000488591 IGBP1P78318 339 aa16.97■□□□□ 0.31
CXCL12-207ENST00000488591 CALCRLQ16602 461 aa16.97■□□□□ 0.31
CXCL12-207ENST00000488591 LARP1BQ659C4 914 aaKnown RBP16.97■□□□□ 0.31
CXCL12-207ENST00000488591 PSRC1Q6PGN9 363 aaPredicted RBP16.97■□□□□ 0.31
CXCL12-207ENST00000488591 ATP8B4Q8TF62 1192 aa16.97■□□□□ 0.31
CXCL12-207ENST00000488591 DHX38Q92620 1227 aaKnown RBP16.97■□□□□ 0.31
CXCL12-207ENST00000488591 TRIP12Q14669 1992 aaPredicted RBP16.97■□□□□ 0.31
CXCL12-207ENST00000488591 CAND2O75155 1236 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 RPLP2P05387 115 aaKnown RBP16.96■□□□□ 0.31
CXCL12-207ENST00000488591 PFKMP08237 780 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 TRAPPC10P48553 1259 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 EPHB4P54760 987 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 ADAM17P78536 824 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 RBL2Q08999 1139 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 PPP2R5CQ13362 524 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 ORC2Q13416 577 aaPredicted RBP16.96■□□□□ 0.31
CXCL12-207ENST00000488591 SHHQ15465 462 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 ZNF484Q5JVG2 852 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 TAF2Q6P1X5 1199 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 LRRC8DQ7L1W4 858 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 RSPH3Q86UC2 560 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 HSCBQ8IWL3 235 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 BBXQ8WY36 941 aaPredicted RBP16.96■□□□□ 0.31
CXCL12-207ENST00000488591 HAS1Q92839 578 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 SNX21Q969T3 373 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 FAM167AQ96KS9 214 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 MTIF3Q9H2K0 278 aaKnown RBP16.96■□□□□ 0.31
CXCL12-207ENST00000488591 NRBP2Q9NSY0 501 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 TUBE1Q9UJT0 475 aa16.96■□□□□ 0.31
CXCL12-207ENST00000488591 MYH9P35579 1960 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms