RNA–Protein interactions for RNA: ENST00000487163.5

USP21-208, Transcript of ubiquitin specific peptidase 21, humanhuman

TSL 1 (best)

Gene USP21, Length 2,514 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-208ENST00000487163 CCDC174Q6PII3 467 aa18.54■□□□□ 0.56
USP21-208ENST00000487163 PIGOQ8TEQ8 1089 aa18.54■□□□□ 0.56
USP21-208ENST00000487163 RAD17O75943 681 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 POLD1P28340 1107 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 CIITAP33076 1130 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 EPS15P42566 896 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 KCNA1Q09470 495 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 RAPGEF1Q13905 1077 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 NFRKBQ6P4R8 1299 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 CREG2Q8IUH2 290 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 EIF2AK1Q9BQI3 630 aaKnown RBP18.53■□□□□ 0.56
USP21-208ENST00000487163 EDEM3Q9BZQ6 932 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 CHMP2AO43633 222 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 NCK2O43639 380 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 CTTNQ14247 550 aaKnown RBP18.53■□□□□ 0.56
USP21-208ENST00000487163 SLC9C1Q4G0N8 1177 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 GDAP1L1Q96MZ0 367 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 WDR18Q9BV38 432 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 SMARCAL1Q9NZC9 954 aa18.53■□□□□ 0.56
USP21-208ENST00000487163 IGLV3-22A0A075B6J6 115 aa18.52■□□□□ 0.56
USP21-208ENST00000487163 SSU72P8A0A1W2PR75 194 aa18.52■□□□□ 0.56
USP21-208ENST00000487163 LRRIQ3A6PVS8 624 aaPredicted RBP18.52■□□□□ 0.56
USP21-208ENST00000487163 ZBTB39O15060 712 aa18.52■□□□□ 0.56
USP21-208ENST00000487163 ACTN1P12814 892 aa18.52■□□□□ 0.56
USP21-208ENST00000487163 MAPK8IP2Q13387 824 aaPredicted RBP18.52■□□□□ 0.56
USP21-208ENST00000487163 KNOP1Q1ED39 458 aaKnown RBP18.52■□□□□ 0.56
USP21-208ENST00000487163 EDRF1Q3B7T1 1238 aa18.52■□□□□ 0.56
USP21-208ENST00000487163 IKZF4Q9H2S9 585 aa18.52■□□□□ 0.56
USP21-208ENST00000487163 EHD2Q9NZN4 543 aa18.52■□□□□ 0.56
USP21-208ENST00000487163 ZBTB12Q9Y330 459 aaPredicted RBP18.52■□□□□ 0.56
USP21-208ENST00000487163 SLC26A4O43511 780 aa18.52■□□□□ 0.55
USP21-208ENST00000487163 MCTP2Q6DN12 878 aa18.52■□□□□ 0.55
USP21-208ENST00000487163 ZC3H3Q8IXZ2 948 aaKnown RBP18.52■□□□□ 0.55
USP21-208ENST00000487163 GSPT2Q8IYD1 628 aaKnown RBP18.52■□□□□ 0.55
USP21-208ENST00000487163 FAM133AQ8N9E0 248 aa18.52■□□□□ 0.55
USP21-208ENST00000487163 GBP3Q9H0R5 595 aa18.52■□□□□ 0.55
USP21-208ENST00000487163 HDAC9Q9UKV0 1011 aa18.52■□□□□ 0.55
USP21-208ENST00000487163 RABGAP1Q9Y3P9 1069 aa18.52■□□□□ 0.55
USP21-208ENST00000487163 SPDYE2BA6NHP3 402 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 SERPING1P05155 500 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 SPDYE6P0CI01 402 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 SLC9A1P19634 815 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 CYP2C19P33261 490 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 NAP1L1P55209 391 aaKnown RBP18.51■□□□□ 0.55
USP21-208ENST00000487163 EZH2Q15910 746 aaKnown RBP18.51■□□□□ 0.55
USP21-208ENST00000487163 EPM2AIP1Q7L775 607 aaPredicted RBP18.51■□□□□ 0.55
USP21-208ENST00000487163 ARHGEF10LQ9HCE6 1279 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 PJA2O43164 708 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 GCNT3O95395 438 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 MRPS25P82663 173 aaKnown RBP18.51■□□□□ 0.55
USP21-208ENST00000487163 EN1Q05925 392 aaPredicted RBP18.51■□□□□ 0.55
USP21-208ENST00000487163 PPP4R3CPQ6ZMV5 832 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 MIGA2Q7L4E1 593 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 RPGRIP1Q96KN7 1286 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 ALS2CR12Q96Q35 445 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 OSBPL9Q96SU4 736 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 TMOD2Q9NZR1 351 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.51■□□□□ 0.55
USP21-208ENST00000487163 HERC5Q9UII4 1024 aaKnown RBP18.51■□□□□ 0.55
USP21-208ENST00000487163 FAM184BQ9ULE4 1060 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 TRAF3IP3Q9Y228 551 aa18.51■□□□□ 0.55
USP21-208ENST00000487163 PIK3CDO00329 1044 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 CLIC2O15247 247 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 TUBBP07437 444 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 MYBL2P10244 700 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 CASP4P49662 377 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 DCAF17Q5H9S7 520 aaPredicted RBP18.5■□□□□ 0.55
USP21-208ENST00000487163 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.5■□□□□ 0.55
USP21-208ENST00000487163 GANQ9H2C0 597 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 ARMCX3Q9UH62 379 aaPredicted RBP18.5■□□□□ 0.55
USP21-208ENST00000487163 ADAMTS1Q9UHI8 967 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 A0A087X0T9 212 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 A0A0U1RQG5 324 aaPredicted RBP18.5■□□□□ 0.55
USP21-208ENST00000487163 AKAP3O75969 853 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 CYP3A4P08684 503 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 FAM228BP0C875 321 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 MATR3P43243 847 aaKnown RBP eCLIP18.5■□□□□ 0.55
USP21-208ENST00000487163 ZNF772Q68DY9 489 aaPredicted RBP18.5■□□□□ 0.55
USP21-208ENST00000487163 TPH2Q8IWU9 490 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 VEZTQ9HBM0 779 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 TMX2Q9Y320 296 aa18.5■□□□□ 0.55
USP21-208ENST00000487163 SRCAPQ6ZRS2 3230 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 RINT1Q6NUQ1 792 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 OTOP1Q7RTM1 612 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 FBXO28Q9NVF7 368 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 ZNF70Q9UC06 446 aaPredicted RBP18.49■□□□□ 0.55
USP21-208ENST00000487163 ZBTB21Q9ULJ3 1066 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 ATAD5Q96QE3 1844 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 ASTN1O14525 1302 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 RBAK-RBAKDNI3L0D1 243 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 TBCAO75347 108 aaKnown RBP18.49■□□□□ 0.55
USP21-208ENST00000487163 EYA4O95677 639 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 DNA2P51530 1060 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 KLHL30Q0D2K2 578 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 KLHDC7AQ5VTJ3 777 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 LRCH2Q5VUJ6 765 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 TCERG1LQ5VWI1 586 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 HDAC7Q8WUI4 952 aa18.49■□□□□ 0.55
USP21-208ENST00000487163 SYN2Q92777 582 aaPredicted RBP18.49■□□□□ 0.55
USP21-208ENST00000487163 DYDC2Q96IM9 177 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms