RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 PDXDC2PQ6P474 469 aa13.24□□□□□ -0.29
CDK5RAP2-217ENST00000484546 MIER3Q7Z3K6 550 aa13.24□□□□□ -0.29
CDK5RAP2-217ENST00000484546 SLFN12Q8IYM2 578 aa13.24□□□□□ -0.29
CDK5RAP2-217ENST00000484546 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
CDK5RAP2-217ENST00000484546 SLC5A5Q92911 643 aa13.24□□□□□ -0.29
CDK5RAP2-217ENST00000484546 ATP6V0A1Q93050 837 aa13.24□□□□□ -0.29
CDK5RAP2-217ENST00000484546 LENG9Q96B70 501 aa13.24□□□□□ -0.29
CDK5RAP2-217ENST00000484546 FAM20AQ96MK3 541 aa13.24□□□□□ -0.29
CDK5RAP2-217ENST00000484546 CTAGE1Q96RT6 745 aa13.24□□□□□ -0.29
CDK5RAP2-217ENST00000484546 WNT8AQ9H1J5 351 aa13.24□□□□□ -0.29
CDK5RAP2-217ENST00000484546 PCDHA10Q9Y5I2 948 aa13.24□□□□□ -0.29
CDK5RAP2-217ENST00000484546 NRCAMQ92823 1304 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 FAM205CA6NFA0 338 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 DHX15O43143 795 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 SLC37A4O43826 429 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 EDIL3O43854 480 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 NEMFO60524 1076 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 LGR5O75473 907 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 CCNE2O96020 404 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 PDCP20941 246 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 IGBP1P78318 339 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 PTK7Q13308 1070 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 CALCRLQ16602 461 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 EARS2Q5JPH6 523 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 C9orf50Q5SZB4 431 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 LARP1BQ659C4 914 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 SWSAP1Q6NVH7 229 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 PLPPR4Q7Z2D5 763 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 NOSTRINQ8IVI9 506 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 TNFRSF25Q93038 417 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 MBOAT7Q96N66 472 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 DISC1Q9NRI5 854 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 SETD4Q9NVD3 440 aa13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 RNF216Q9NWF9 866 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP2-217ENST00000484546 POTEB3A0JP26 581 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 TBX3O15119 743 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 ATG7O95352 703 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 CSF2RAP15509 400 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 HOXC8P31273 242 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 MCM7P33993 719 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 CCL23P55773 120 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 HIC1Q14526 733 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 SHHQ15465 462 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 GRIK4Q16099 956 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 POTEBQ6S5H4 581 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 ABHD15Q6UXT9 468 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 TRMT1LQ7Z2T5 733 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 RDM1Q8NG50 284 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 ETNPPLQ8TBG4 499 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 DHX38Q92620 1227 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 GJA10Q969M2 543 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 FAM167AQ96KS9 214 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 UNC45AQ9H3U1 944 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 RNPEPQ9H4A4 650 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 GABBR1Q9UBS5 961 aa13.22□□□□□ -0.29
CDK5RAP2-217ENST00000484546 VPS37CA5D8V6 355 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 RRN3P2A6NIE6 340 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 PITPNM1O00562 1244 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 SOX1O00570 391 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 PSMD10O75832 226 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 TRAPPC10P48553 1259 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 CUL4AQ13619 759 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 LRIT3Q3SXY7 679 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 TTC38Q5R3I4 469 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 RSPH3Q86UC2 560 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 CCDC60Q8IWA6 550 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 RPUSD2Q8IZ73 545 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 AFAP1L1Q8TED9 768 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 LMBR1Q8WVP7 490 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 SNX21Q969T3 373 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 PCYT2Q99447 389 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 MTIF3Q9H2K0 278 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 KCNMB3Q9NPA1 279 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 TUBE1Q9UJT0 475 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.29
CDK5RAP2-217ENST00000484546 SCN5AQ14524 2016 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TRIP12Q14669 1992 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TREHO43280 583 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 HBP1O60381 514 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 DKC1O60832 514 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 INSRRP14616 1297 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 SELPP16109 830 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 RFC2P35250 354 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 THPOP40225 353 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 ZNF200P98182 395 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 RBL2Q08999 1139 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 ORC2Q13416 577 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 PLCB4Q15147 1175 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 NCAPH2Q6IBW4 605 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 TAF2Q6P1X5 1199 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 PSRC1Q6PGN9 363 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 LRRC8DQ7L1W4 858 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 C16orf59Q7L2K0 433 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 ATP8B4Q8TF62 1192 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 WNT8BQ93098 351 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 INTS4Q96HW7 963 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 SCLYQ96I15 445 aa13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 FTOQ9C0B1 505 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDK5RAP2-217ENST00000484546 IL23AQ9NPF7 189 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms