RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 MCTP2Q6DN12 878 aa11.44□□□□□ -0.58
CPSF4-213ENST00000484112 XRRA1Q6P2D8 792 aa11.44□□□□□ -0.58
CPSF4-213ENST00000484112 IFIH1Q9BYX4 1025 aaKnown RBP11.44□□□□□ -0.58
CPSF4-213ENST00000484112 UPF3BQ9BZI7 483 aaKnown RBP11.44□□□□□ -0.58
CPSF4-213ENST00000484112 NSUN3Q9H649 340 aaKnown RBP11.44□□□□□ -0.58
CPSF4-213ENST00000484112 PSTPIP2Q9H939 334 aa11.44□□□□□ -0.58
CPSF4-213ENST00000484112 SETD4Q9NVD3 440 aa11.44□□□□□ -0.58
CPSF4-213ENST00000484112 RTEL1Q9NZ71 1219 aa11.44□□□□□ -0.58
CPSF4-213ENST00000484112 NAP1L2Q9ULW6 460 aaPredicted RBP11.44□□□□□ -0.58
CPSF4-213ENST00000484112 MYH7BA7E2Y1 1941 aa11.44□□□□□ -0.58
CPSF4-213ENST00000484112 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-213ENST00000484112 DCXO43602 365 aa11.43□□□□□ -0.58
CPSF4-213ENST00000484112 CDKL5O76039 1030 aa11.43□□□□□ -0.58
CPSF4-213ENST00000484112 SEC24BO95487 1268 aa11.43□□□□□ -0.58
CPSF4-213ENST00000484112 TGFB3P10600 412 aa11.43□□□□□ -0.58
CPSF4-213ENST00000484112 ADD1P35611 737 aaKnown RBP11.43□□□□□ -0.58
CPSF4-213ENST00000484112 RBM25P49756 843 aaKnown RBP11.43□□□□□ -0.58
CPSF4-213ENST00000484112 AKAP17AQ02040 695 aaKnown RBP11.43□□□□□ -0.58
CPSF4-213ENST00000484112 SP4Q02446 784 aa11.43□□□□□ -0.58
CPSF4-213ENST00000484112 CLUL1Q15846 466 aa11.43□□□□□ -0.58
CPSF4-213ENST00000484112 PFKFB3Q16875 520 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-213ENST00000484112 UTP14CQ5TAP6 766 aaKnown RBP11.43□□□□□ -0.58
CPSF4-213ENST00000484112 TRIM22Q8IYM9 498 aa11.43□□□□□ -0.58
CPSF4-213ENST00000484112 CMTR1Q8N1G2 835 aaKnown RBP11.43□□□□□ -0.58
CPSF4-213ENST00000484112 FIBCD1Q8N539 461 aa11.43□□□□□ -0.58
CPSF4-213ENST00000484112 SMARCC2Q8TAQ2 1214 aa11.43□□□□□ -0.58
CPSF4-213ENST00000484112 PABPC5Q96DU9 382 aaKnown RBP11.43□□□□□ -0.58
CPSF4-213ENST00000484112 BARHL2Q9NY43 387 aa11.43□□□□□ -0.58
CPSF4-213ENST00000484112 FAM50BQ9Y247 325 aa11.43□□□□□ -0.58
CPSF4-213ENST00000484112 V9GY48 417 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-213ENST00000484112 BDP1A6H8Y1 2624 aa11.43□□□□□ -0.58
CPSF4-213ENST00000484112 REV3LO60673 3130 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 ESYT2A0FGR8 921 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 MEIS2O14770 477 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 CPLX1O14810 134 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 FOSP01100 380 aaPredicted RBP11.42□□□□□ -0.58
CPSF4-213ENST00000484112 GNAT1P11488 350 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 SCG2P13521 617 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 CTNNB1P35222 781 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 ARHGAP4P98171 946 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 NTRK3Q16288 839 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 GNPTABQ3T906 1256 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 CYFIP1Q7L576 1253 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 HEATR3Q7Z4Q2 680 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 RPAINQ86UA6 219 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 TRIM50Q86XT4 487 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 RAB11FIP4Q86YS3 637 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 CCDC82Q8N4S0 544 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 PIBF1Q8WXW3 757 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 C22orf23Q9BZE7 217 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 IGFLR1Q9H665 355 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 EHMT1Q9H9B1 1298 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 SH3GLB2Q9NR46 395 aa11.42□□□□□ -0.58
CPSF4-213ENST00000484112 BAZ2BQ9UIF8 2168 aaKnown RBP11.41□□□□□ -0.58
CPSF4-213ENST00000484112 PFKFB2O60825 505 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 CAND2O75155 1236 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 GNA11P29992 359 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 MRE11P49959 708 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 NEK4P51957 841 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 NAPAP54920 295 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 ZP2Q05996 745 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 AP3B2Q13367 1082 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 NEDD9Q14511 834 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 WWC2Q6AWC2 1192 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 CCDC148Q8NFR7 591 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 APBB2Q92870 758 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 GPR20Q99678 358 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 SLKQ9H2G2 1235 aaPredicted RBP11.41□□□□□ -0.58
CPSF4-213ENST00000484112 RIC8AQ9NPQ8 531 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 ZNF215Q9UL58 517 aaPredicted RBP11.41□□□□□ -0.58
CPSF4-213ENST00000484112 TELO2Q9Y4R8 837 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 BRWD1Q9NSI6 2320 aa11.41□□□□□ -0.58
CPSF4-213ENST00000484112 MICAL3Q7RTP6 2002 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 POTEB3A0JP26 581 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 SPDYE3A6NKU9 549 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 STXBP3O00186 592 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 GRM6O15303 877 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 DEXIO95424 95 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 GHRP10912 638 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 HOXC8P31273 242 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 ADCY7P51828 1080 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 AK2P54819 239 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 MRPS9P82933 396 aaKnown RBP11.4□□□□□ -0.58
CPSF4-213ENST00000484112 SSRP1Q08945 709 aaKnown RBP11.4□□□□□ -0.58
CPSF4-213ENST00000484112 PCNX4Q63HM2 1172 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 POTEBQ6S5H4 581 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 METTL7BQ6UX53 244 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 ADHFE1Q8IWW8 467 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 BICD2Q8TD16 824 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 CDHR1Q96JP9 859 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 FBXL18Q96ME1 805 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 ZMYND12Q9H0C1 365 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 C6orf50Q9HD87 102 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 PRKAG3Q9UGI9 489 aa11.4□□□□□ -0.58
CPSF4-213ENST00000484112 STK36Q9NRP7 1315 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 SMCO2A6NFE2 343 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 SPATA31C2B4DYI2 1134 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 MAFGO15525 162 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 FIBPO43427 364 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 NCK2O43639 380 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms