RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 HSP90AA1P07900 732 aaKnown RBP10.9□□□□□ -0.66
HMG20B-210ENST00000483417 SELPP16109 830 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 KCNA2P16389 499 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 CIITAP33076 1130 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 USP11P51784 963 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 RABGGTBP53611 331 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 PTK7Q13308 1070 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 BECN1Q14457 450 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 NONOQ15233 471 aaKnown RBP eCLIP10.9□□□□□ -0.66
HMG20B-210ENST00000483417 ZNF174Q15697 407 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 RAB30Q15771 203 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 TCTN1Q2MV58 587 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 LETM2Q2VYF4 491 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 CYFIP1Q7L576 1253 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 KRT25Q7Z3Z0 450 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 TEX2Q8IWB9 1127 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 FAM177A1Q8N128 213 aaPredicted RBP10.9□□□□□ -0.66
HMG20B-210ENST00000483417 PHOSPHO2Q8TCD6 241 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 LENG9Q96B70 501 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 FOXP1Q9H334 677 aaPredicted RBP10.9□□□□□ -0.66
HMG20B-210ENST00000483417 RNPEPQ9H4A4 650 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 PKD2L1Q9P0L9 805 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 NOD1Q9Y239 953 aa10.9□□□□□ -0.66
HMG20B-210ENST00000483417 EYSQ5T1H1 3165 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 CYP3A7-CYP3A51PA0A087WV96 503 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 GSTTP1A0A1W2PQM5 241 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 STX6O43752 255 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 SLC37A4O43826 429 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 LGALS2P05162 132 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 MYOGP15173 224 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 CYP3A7P24462 503 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 DDIT3P35638 169 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 ZNF76P36508 570 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 ADAM17P78536 824 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 RESTQ13127 1097 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 MBTPS1Q14703 1052 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 SAFBQ15424 915 aaKnown RBP eCLIP10.89□□□□□ -0.67
HMG20B-210ENST00000483417 CEP55Q53EZ4 464 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 PRR16Q569H4 304 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 LRRC8DQ7L1W4 858 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 NLRX1Q86UT6 975 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 SERINC5Q86VE9 423 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 PLA2G4DQ86XP0 818 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 NOSTRINQ8IVI9 506 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 C4orf32Q8N8J7 132 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 GPRASP2Q96D09 838 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 MBOAT7Q96N66 472 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 TMEM60Q9H2L4 133 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 NKX2-4Q9H2Z4 354 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 KCNH7Q9NS40 1196 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 MSRAQ9UJ68 235 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 PCDHA11Q9Y5I1 949 aa10.89□□□□□ -0.67
HMG20B-210ENST00000483417 MSH4O15457 936 aa10.88□□□□□ -0.67
HMG20B-210ENST00000483417 MAFGO15525 162 aa10.88□□□□□ -0.67
HMG20B-210ENST00000483417 DHX15O43143 795 aaKnown RBP10.88□□□□□ -0.67
HMG20B-210ENST00000483417 PARNO95453 639 aaKnown RBP10.88□□□□□ -0.67
HMG20B-210ENST00000483417 ACTN1P12814 892 aa10.88□□□□□ -0.67
HMG20B-210ENST00000483417 FOSL2P15408 326 aa10.88□□□□□ -0.67
HMG20B-210ENST00000483417 ATP2A2P16615 1042 aaKnown RBP10.88□□□□□ -0.67
HMG20B-210ENST00000483417 ITGB3BPQ13352 177 aaPredicted RBP10.88□□□□□ -0.67
HMG20B-210ENST00000483417 MKRN4PQ13434 485 aaPredicted RBP10.88□□□□□ -0.67
HMG20B-210ENST00000483417 ADGRE1Q14246 886 aa10.88□□□□□ -0.67
HMG20B-210ENST00000483417 FOXD4L6Q3SYB3 417 aaPredicted RBP10.88□□□□□ -0.67
HMG20B-210ENST00000483417 ZNF618Q5T7W0 954 aa10.88□□□□□ -0.67
HMG20B-210ENST00000483417 FOXD4L3Q6VB84 417 aaPredicted RBP10.88□□□□□ -0.67
HMG20B-210ENST00000483417 NEK8Q86SG6 692 aa10.88□□□□□ -0.67
HMG20B-210ENST00000483417 CCDC155Q8N6L0 562 aa10.88□□□□□ -0.67
HMG20B-210ENST00000483417 GIMAP8Q8ND71 665 aaPredicted RBP10.88□□□□□ -0.67
HMG20B-210ENST00000483417 MAFAQ8NHW3 353 aaPredicted RBP10.88□□□□□ -0.67
HMG20B-210ENST00000483417 HAS1Q92839 578 aa10.88□□□□□ -0.67
HMG20B-210ENST00000483417 AGO4Q9HCK5 861 aaKnown RBP10.88□□□□□ -0.67
HMG20B-210ENST00000483417 PCDHB6Q9Y5E3 794 aa10.88□□□□□ -0.67
HMG20B-210ENST00000483417 TRIP12Q14669 1992 aaPredicted RBP10.88□□□□□ -0.67
HMG20B-210ENST00000483417 TANC1Q9C0D5 1861 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 TET1Q8NFU7 2136 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 ZBBXA8MT70 800 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 DLL1O00548 723 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 TREHO43280 583 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 CCNT1O60563 726 aaKnown RBP10.87□□□□□ -0.67
HMG20B-210ENST00000483417 BAIAP3O94812 1187 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 SMIM10L2AP0DMW4 78 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 SMIM10L2BP0DMW5 78 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 Q4G0T1 1027 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 MCTP2Q6DN12 878 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 TRIM50Q86XT4 487 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 HERC6Q8IVU3 1022 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.87□□□□□ -0.67
HMG20B-210ENST00000483417 CDHR1Q96JP9 859 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 SLC9A7Q96T83 725 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 OSBPL7Q9BZF2 842 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 FTOQ9C0B1 505 aaKnown RBP eCLIP10.87□□□□□ -0.67
HMG20B-210ENST00000483417 PRDM12Q9H4Q4 367 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 SLC28A3Q9HAS3 691 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 BRMS1Q9HCU9 246 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 SETD4Q9NVD3 440 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 TFIP11Q9UBB9 837 aaKnown RBP10.87□□□□□ -0.67
HMG20B-210ENST00000483417 DAXXQ9UER7 740 aaPredicted RBP10.87□□□□□ -0.67
HMG20B-210ENST00000483417 KIF3AQ9Y496 699 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 GBF1Q92538 1859 aa10.87□□□□□ -0.67
HMG20B-210ENST00000483417 CHD9Q3L8U1 2897 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms