RNA–Protein interactions for RNA: ENST00000483342.5

SNHG11-215, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 1 (best)

Gene SNHG11, Length 1,509 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-215ENST00000483342 LHX8Q68G74 356 aa19.02■□□□□ 0.64
SNHG11-215ENST00000483342 CATSPER3Q86XQ3 398 aa19.02■□□□□ 0.64
SNHG11-215ENST00000483342 FSIP1Q8NA03 581 aa19.02■□□□□ 0.64
SNHG11-215ENST00000483342 BANK1Q8NDB2 785 aa19.02■□□□□ 0.64
SNHG11-215ENST00000483342 NEK9Q8TD19 979 aa19.02■□□□□ 0.64
SNHG11-215ENST00000483342 GLG1Q92896 1179 aa19.02■□□□□ 0.64
SNHG11-215ENST00000483342 HSD17B14Q9BPX1 270 aa19.02■□□□□ 0.64
SNHG11-215ENST00000483342 POLR3CQ9BUI4 534 aaPredicted RBP19.02■□□□□ 0.64
SNHG11-215ENST00000483342 PANK2Q9BZ23 570 aa19.02■□□□□ 0.64
SNHG11-215ENST00000483342 CCSER1Q9C0I3 900 aa19.02■□□□□ 0.64
SNHG11-215ENST00000483342 UPF3AQ9H1J1 476 aaKnown RBP19.02■□□□□ 0.64
SNHG11-215ENST00000483342 ZNF302Q9NR11 478 aa19.02■□□□□ 0.64
SNHG11-215ENST00000483342 GABBR1Q9UBS5 961 aa19.02■□□□□ 0.64
SNHG11-215ENST00000483342 SYNRGQ9UMZ2 1314 aa19.02■□□□□ 0.64
SNHG11-215ENST00000483342 HTTP42858 3142 aa19.01■□□□□ 0.63
SNHG11-215ENST00000483342 A0A1B0GVL5 298 aa19.01■□□□□ 0.63
SNHG11-215ENST00000483342 QARSP47897 775 aaKnown RBP19.01■□□□□ 0.63
SNHG11-215ENST00000483342 STAT5BP51692 787 aa19.01■□□□□ 0.63
SNHG11-215ENST00000483342 IRX5P78411 483 aaPredicted RBP19.01■□□□□ 0.63
SNHG11-215ENST00000483342 RNF180Q86T96 592 aa19.01■□□□□ 0.63
SNHG11-215ENST00000483342 MRPS27Q92552 414 aaKnown RBP19.01■□□□□ 0.63
SNHG11-215ENST00000483342 DEFB118Q96PH6 123 aa19.01■□□□□ 0.63
SNHG11-215ENST00000483342 MMTAG2Q9BU76 263 aaKnown RBP19.01■□□□□ 0.63
SNHG11-215ENST00000483342 TUFT1Q9NNX1 390 aa19.01■□□□□ 0.63
SNHG11-215ENST00000483342 PAK6Q9NQU5 681 aaPredicted RBP19.01■□□□□ 0.63
SNHG11-215ENST00000483342 LMBRD1Q9NUN5 540 aa19.01■□□□□ 0.63
SNHG11-215ENST00000483342 DKC1O60832 514 aaKnown RBP eCLIP19■□□□□ 0.635e-81■■■■■ 37.7
SNHG11-215ENST00000483342 MED24O75448 989 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 MYL3P08590 195 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 SPATA31C1P0DKV0 1188 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 PSMC5P62195 406 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 KARSQ15046 597 aaKnown RBP19■□□□□ 0.63
SNHG11-215ENST00000483342 PDXDC2PQ6P474 469 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 CCDC60Q8IWA6 550 aaPredicted RBP19■□□□□ 0.63
SNHG11-215ENST00000483342 ARRDC4Q8NCT1 418 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 ATP6V0A1Q93050 837 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 ABHD8Q96I13 439 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 PLIN2Q99541 437 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 LXNQ9BS40 222 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 SMARCAD1Q9H4L7 1026 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 ZSWIM4Q9H7M6 989 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 IGKV6D-21A0A0A0MT36 114 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 MYADML2A6NDP7 307 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 SLC26A4O43511 780 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 KPNA6O60684 536 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 ADAMTS4O75173 837 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 NKX3-2P78367 333 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 CCDC73Q6ZRK6 1079 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 TRMT1LQ7Z2T5 733 aaKnown RBP19■□□□□ 0.63
SNHG11-215ENST00000483342 CKAP2LQ8IYA6 745 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 PDILTQ8N807 584 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 PCYT2Q99447 389 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 NT5C3AQ9H0P0 336 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 KCNH3Q9ULD8 1083 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 KIAA1024Q9UPX6 916 aa19■□□□□ 0.63
SNHG11-215ENST00000483342 MAFBQ9Y5Q3 323 aaPredicted RBP19■□□□□ 0.63
SNHG11-215ENST00000483342 KDM3AQ9Y4C1 1321 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 POTEB3A0JP26 581 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 DDX11L8A8MPP1 907 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 CTAGE5O15320 804 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 LGR5O75473 907 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 LGALS2P05162 132 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 HOXD8P13378 290 aaPredicted RBP18.99■□□□□ 0.63
SNHG11-215ENST00000483342 PFKFB1P16118 471 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 MUTP22033 750 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 RRAGBQ5VZM2 374 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 POTEBQ6S5H4 581 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 PLPPR4Q7Z2D5 763 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 PCSK9Q8NBP7 692 aaKnown RBP18.99■□□□□ 0.63
SNHG11-215ENST00000483342 KLHDC9Q8NEP7 349 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 AFAP1L1Q8TED9 768 aa18.99■□□□□ 0.63
SNHG11-215ENST00000483342 DDX19AQ9NUU7 478 aaKnown RBP18.99■□□□□ 0.63
SNHG11-215ENST00000483342 CENPFP49454 3210 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 POLR2DO15514 142 aaKnown RBP18.98■□□□□ 0.63
SNHG11-215ENST00000483342 ZNF286BP0CG31 522 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 NDUFA8P51970 172 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 GRB10Q13322 594 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 LRRC41Q15345 812 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 KCNA10Q16322 511 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 ECM1Q16610 540 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 UGCGQ16739 394 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 HYIQ5T013 277 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 TRIM50Q86XT4 487 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 C4orf19Q8IY42 314 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 NACC1Q96RE7 527 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 PYM1Q9BRP8 204 aaKnown RBP18.98■□□□□ 0.63
SNHG11-215ENST00000483342 TMEM106CQ9BVX2 250 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 ZNF215Q9UL58 517 aaPredicted RBP18.98■□□□□ 0.63
SNHG11-215ENST00000483342 DNM3Q9UQ16 869 aa18.98■□□□□ 0.63
SNHG11-215ENST00000483342 EMSYQ7Z589 1322 aa18.97■□□□□ 0.63
SNHG11-215ENST00000483342 H3BRB1 525 aa18.97■□□□□ 0.63
SNHG11-215ENST00000483342 TFRCP02786 760 aaKnown RBP18.97■□□□□ 0.63
SNHG11-215ENST00000483342 GJB1P08034 283 aa18.97■□□□□ 0.63
SNHG11-215ENST00000483342 MARK3P27448 753 aa18.97■□□□□ 0.63
SNHG11-215ENST00000483342 CST5P28325 142 aaPredicted RBP18.97■□□□□ 0.63
SNHG11-215ENST00000483342 SYKP43405 635 aa18.97■□□□□ 0.63
SNHG11-215ENST00000483342 SLC26A2P50443 739 aa18.97■□□□□ 0.63
SNHG11-215ENST00000483342 CHMP4BP1P59074 171 aa18.97■□□□□ 0.63
SNHG11-215ENST00000483342 POTEGQ6S5H5 508 aa18.97■□□□□ 0.63
SNHG11-215ENST00000483342 PNMA5Q96PV4 448 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms