RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 CEP290O15078 2479 aa18.73■□□□□ 0.59
HMGN1-214ENST00000482733 A0A1W2PPC1 479 aa18.73■□□□□ 0.59
HMGN1-214ENST00000482733 PITPNM1O00562 1244 aa18.73■□□□□ 0.59
HMGN1-214ENST00000482733 U2AF2P26368 475 aaKnown RBP eCLIP18.73■□□□□ 0.59
HMGN1-214ENST00000482733 MARK3P27448 753 aa18.73■□□□□ 0.59
HMGN1-214ENST00000482733 TRAPPC10P48553 1259 aa18.73■□□□□ 0.59
HMGN1-214ENST00000482733 FPGSQ05932 587 aa18.73■□□□□ 0.59
HMGN1-214ENST00000482733 ORC2Q13416 577 aaPredicted RBP18.73■□□□□ 0.59
HMGN1-214ENST00000482733 LARP1BQ659C4 914 aaKnown RBP18.73■□□□□ 0.59
HMGN1-214ENST00000482733 SLFN12Q8IYM2 578 aa18.73■□□□□ 0.59
HMGN1-214ENST00000482733 RETREG2Q8NC44 543 aa18.73■□□□□ 0.59
HMGN1-214ENST00000482733 ATP6V0A1Q93050 837 aa18.73■□□□□ 0.59
HMGN1-214ENST00000482733 DISC1Q9NRI5 854 aa18.73■□□□□ 0.59
HMGN1-214ENST00000482733 NOL7Q9UMY1 257 aaKnown RBP18.73■□□□□ 0.59
HMGN1-214ENST00000482733 COLQQ9Y215 455 aaPredicted RBP18.73■□□□□ 0.59
HMGN1-214ENST00000482733 PDCP20941 246 aa18.72■□□□□ 0.59
HMGN1-214ENST00000482733 PPFIA1Q13136 1202 aa18.72■□□□□ 0.59
HMGN1-214ENST00000482733 PPIGQ13427 754 aaKnown RBP eCLIP18.72■□□□□ 0.59
HMGN1-214ENST00000482733 SWSAP1Q6NVH7 229 aa18.72■□□□□ 0.59
HMGN1-214ENST00000482733 PDXDC2PQ6P474 469 aa18.72■□□□□ 0.59
HMGN1-214ENST00000482733 HSCBQ8IWL3 235 aa18.72■□□□□ 0.59
HMGN1-214ENST00000482733 UNC45AQ9H3U1 944 aa18.72■□□□□ 0.59
HMGN1-214ENST00000482733 SETD4Q9NVD3 440 aa18.72■□□□□ 0.59
HMGN1-214ENST00000482733 MAFBQ9Y5Q3 323 aaPredicted RBP18.72■□□□□ 0.59
HMGN1-214ENST00000482733 RRN3P2A6NIE6 340 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 CHMP2AO43633 222 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 NEMFO60524 1076 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 CYP2C18P33260 490 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 RBL2Q08999 1139 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 PLCB4Q15147 1175 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 CALCRLQ16602 461 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 B3GNT9Q6UX72 402 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 MIER3Q7Z3K6 550 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 SERINC5Q86VE9 423 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 CCDC60Q8IWA6 550 aaPredicted RBP18.71■□□□□ 0.59
HMGN1-214ENST00000482733 CTAGE1Q96RT6 745 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 TRPC6Q9Y210 931 aa18.71■□□□□ 0.59
HMGN1-214ENST00000482733 POTEB3A0JP26 581 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 KIF28PB7ZC32 967 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 HBP1O60381 514 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 ZNF200P98182 395 aaPredicted RBP18.7■□□□□ 0.58
HMGN1-214ENST00000482733 PPP2R5CQ13362 524 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 HIC1Q14526 733 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 GRIK4Q16099 956 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 MCTP1Q6DN14 999 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 POTEBQ6S5H4 581 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 ATP8B4Q8TF62 1192 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 LMBR1Q8WVP7 490 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 HAS1Q92839 578 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 GJA10Q969M2 543 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 GABBR1Q9UBS5 961 aa18.7■□□□□ 0.58
HMGN1-214ENST00000482733 TREHO43280 583 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 CAND2O75155 1236 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 PARNO95453 639 aaKnown RBP18.69■□□□□ 0.58
HMGN1-214ENST00000482733 RPLP2P05387 115 aaKnown RBP18.69■□□□□ 0.58
HMGN1-214ENST00000482733 INSRRP14616 1297 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 ATP2B1P20020 1258 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 RFC2P35250 354 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 CCL23P55773 120 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 ADAM17P78536 824 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 TAF2Q6P1X5 1199 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 CKAP2LQ8IYA6 745 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 RPUSD2Q8IZ73 545 aaKnown RBP18.69■□□□□ 0.58
HMGN1-214ENST00000482733 TDHQ8IZJ6 230 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 BBXQ8WY36 941 aaPredicted RBP18.69■□□□□ 0.58
HMGN1-214ENST00000482733 FAM167AQ96KS9 214 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 WNT8AQ9H1J5 351 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 VAV3Q9UKW4 847 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 UMODL1Q5DID0 1318 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 IGSF9BQ9UPX0 1349 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 DOCK5Q9H7D0 1870 aa18.69■□□□□ 0.58
HMGN1-214ENST00000482733 CSF2RAP15509 400 aa18.68■□□□□ 0.58
HMGN1-214ENST00000482733 SELPP16109 830 aa18.68■□□□□ 0.58
HMGN1-214ENST00000482733 MCM7P33993 719 aa18.68■□□□□ 0.58
HMGN1-214ENST00000482733 ZNF484Q5JVG2 852 aa18.68■□□□□ 0.58
HMGN1-214ENST00000482733 TTC38Q5R3I4 469 aa18.68■□□□□ 0.58
HMGN1-214ENST00000482733 DHX38Q92620 1227 aaKnown RBP18.68■□□□□ 0.58
HMGN1-214ENST00000482733 IL23AQ9NPF7 189 aa18.68■□□□□ 0.58
HMGN1-214ENST00000482733 PCDH10Q9P2E7 1040 aa18.68■□□□□ 0.58
HMGN1-214ENST00000482733 TUBE1Q9UJT0 475 aa18.68■□□□□ 0.58
HMGN1-214ENST00000482733 PCDHA12Q9UN75 941 aa18.68■□□□□ 0.58
HMGN1-214ENST00000482733 CEP131Q9UPN4 1083 aa18.68■□□□□ 0.58
HMGN1-214ENST00000482733 COL1A2P08123 1366 aa18.68■□□□□ 0.58
HMGN1-214ENST00000482733 MBLAC1A4D2B0 266 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-214ENST00000482733 WNT7AO00755 349 aa18.67■□□□□ 0.58
HMGN1-214ENST00000482733 DKC1O60832 514 aaKnown RBP eCLIP18.67■□□□□ 0.58
HMGN1-214ENST00000482733 PFKMP08237 780 aa18.67■□□□□ 0.58
HMGN1-214ENST00000482733 IQCF3P0C7M6 154 aa18.67■□□□□ 0.58
HMGN1-214ENST00000482733 CKBP12277 381 aa18.67■□□□□ 0.58
HMGN1-214ENST00000482733 TRIM71Q2Q1W2 868 aaKnown RBP18.67■□□□□ 0.58
HMGN1-214ENST00000482733 RILPL1Q5EBL4 403 aa18.67■□□□□ 0.58
HMGN1-214ENST00000482733 PSRC1Q6PGN9 363 aaPredicted RBP18.67■□□□□ 0.58
HMGN1-214ENST00000482733 MTMR9Q96QG7 549 aa18.67■□□□□ 0.58
HMGN1-214ENST00000482733 NRBP2Q9NSY0 501 aa18.67■□□□□ 0.58
HMGN1-214ENST00000482733 LTBP2Q14767 1821 aa18.67■□□□□ 0.58
HMGN1-214ENST00000482733 ATP4AP20648 1035 aa18.66■□□□□ 0.58
HMGN1-214ENST00000482733 THPOP40225 353 aa18.66■□□□□ 0.58
HMGN1-214ENST00000482733 IGBP1P78318 339 aa18.66■□□□□ 0.58
HMGN1-214ENST00000482733 EPHA7Q15375 998 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms