RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 SLC26A2P50443 739 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 HIC1Q14526 733 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 LRIT3Q3SXY7 679 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 PPP4R3AQ6IN85 833 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 SWSAP1Q6NVH7 229 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 PSRC1Q6PGN9 363 aaPredicted RBP20.79■□□□□ 0.92
SMIM4-204ENST00000482728 C16orf59Q7L2K0 433 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 SERINC5Q86VE9 423 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 RNPC3Q96LT9 517 aaKnown RBP20.79■□□□□ 0.92
SMIM4-204ENST00000482728 MBOAT7Q96N66 472 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 TEKT3Q9BXF9 490 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 ZNF302Q9NR11 478 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 TRPC6Q9Y210 931 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 PCDHA10Q9Y5I2 948 aa20.79■□□□□ 0.92
SMIM4-204ENST00000482728 TREHO43280 583 aa20.78■□□□□ 0.92
SMIM4-204ENST00000482728 CD2BP2O95400 341 aaKnown RBP20.78■□□□□ 0.92
SMIM4-204ENST00000482728 FGBP02675 491 aa20.78■□□□□ 0.92
SMIM4-204ENST00000482728 SELPP16109 830 aa20.78■□□□□ 0.92
SMIM4-204ENST00000482728 RFC2P35250 354 aa20.78■□□□□ 0.92
SMIM4-204ENST00000482728 FXR1P51114 621 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMIM4-204ENST00000482728 PDXDC2PQ6P474 469 aa20.78■□□□□ 0.92
SMIM4-204ENST00000482728 ZNF365Q70YC5 407 aa20.78■□□□□ 0.92
SMIM4-204ENST00000482728 DEFB128Q7Z7B8 93 aa20.78■□□□□ 0.92
SMIM4-204ENST00000482728 LMBR1Q8WVP7 490 aa20.78■□□□□ 0.92
SMIM4-204ENST00000482728 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMIM4-204ENST00000482728 IGKV6D-21A0A0A0MT36 114 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 RRN3P2A6NIE6 340 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 WDR64B1ANS9 1081 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 CKBP12277 381 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 INSRRP14616 1297 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 HOXC8P31273 242 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 THPOP40225 353 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 GNL2Q13823 731 aaKnown RBP20.77■□□□□ 0.92
SMIM4-204ENST00000482728 PLCB4Q15147 1175 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 GRIK4Q16099 956 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 EARS2Q5JPH6 523 aaKnown RBP20.77■□□□□ 0.92
SMIM4-204ENST00000482728 TMEM240Q5SV17 173 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 LRRC8DQ7L1W4 858 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 CKAP2LQ8IYA6 745 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 FBXO18Q8NFZ0 1043 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 DHX38Q92620 1227 aaKnown RBP20.77■□□□□ 0.92
SMIM4-204ENST00000482728 TNFRSF25Q93038 417 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 FTOQ9C0B1 505 aaKnown RBP eCLIP20.77■□□□□ 0.92
SMIM4-204ENST00000482728 DISC1Q9NRI5 854 aa20.77■□□□□ 0.92
SMIM4-204ENST00000482728 POTEB3A0JP26 581 aa20.76■□□□□ 0.91
SMIM4-204ENST00000482728 FAM205CA6NFA0 338 aa20.76■□□□□ 0.91
SMIM4-204ENST00000482728 CHMP2AO43633 222 aa20.76■□□□□ 0.91
SMIM4-204ENST00000482728 PARNO95453 639 aaKnown RBP20.76■□□□□ 0.91
SMIM4-204ENST00000482728 PFKMP08237 780 aa20.76■□□□□ 0.91
SMIM4-204ENST00000482728 SFNP31947 248 aa20.76■□□□□ 0.91
SMIM4-204ENST00000482728 IGBP1P78318 339 aa20.76■□□□□ 0.91
SMIM4-204ENST00000482728 RBL2Q08999 1139 aa20.76■□□□□ 0.91
SMIM4-204ENST00000482728 POTEBQ6S5H4 581 aa20.76■□□□□ 0.91
SMIM4-204ENST00000482728 GJA10Q969M2 543 aa20.76■□□□□ 0.91
SMIM4-204ENST00000482728 FAM20AQ96MK3 541 aa20.76■□□□□ 0.91
SMIM4-204ENST00000482728 MTIF3Q9H2K0 278 aaKnown RBP20.76■□□□□ 0.91
SMIM4-204ENST00000482728 SLC37A4O43826 429 aa20.75■□□□□ 0.91
SMIM4-204ENST00000482728 PSMD10O75832 226 aa20.75■□□□□ 0.91
SMIM4-204ENST00000482728 BAG4O95429 457 aaKnown RBP20.75■□□□□ 0.91
SMIM4-204ENST00000482728 JAK3P52333 1124 aa20.75■□□□□ 0.91
SMIM4-204ENST00000482728 CCDC60Q8IWA6 550 aaPredicted RBP20.75■□□□□ 0.91
SMIM4-204ENST00000482728 ETNPPLQ8TBG4 499 aa20.75■□□□□ 0.91
SMIM4-204ENST00000482728 GABBR1Q9UBS5 961 aa20.75■□□□□ 0.91
SMIM4-204ENST00000482728 HBP1O60381 514 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 ACTN1P12814 892 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 ADAM17P78536 824 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 TRIM71Q2Q1W2 868 aaKnown RBP20.74■□□□□ 0.91
SMIM4-204ENST00000482728 ZNF618Q5T7W0 954 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 TAF2Q6P1X5 1199 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 OTOP2Q7RTS6 562 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 MIER3Q7Z3K6 550 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 RSPH3Q86UC2 560 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 RDM1Q8NG50 284 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 ATP8B4Q8TF62 1192 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 WNT8BQ93098 351 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 FOXP1Q9H334 677 aaPredicted RBP20.74■□□□□ 0.91
SMIM4-204ENST00000482728 UNC45AQ9H3U1 944 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 TUBE1Q9UJT0 475 aa20.74■□□□□ 0.91
SMIM4-204ENST00000482728 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.74■□□□□ 0.91
SMIM4-204ENST00000482728 MAFBQ9Y5Q3 323 aaPredicted RBP20.74■□□□□ 0.91
SMIM4-204ENST00000482728 RSPH10B2B2RC85 870 aa20.73■□□□□ 0.91
SMIM4-204ENST00000482728 SOX1O00570 391 aaPredicted RBP20.73■□□□□ 0.91
SMIM4-204ENST00000482728 TBX3O15119 743 aa20.73■□□□□ 0.91
SMIM4-204ENST00000482728 RSPH10BP0C881 870 aa20.73■□□□□ 0.91
SMIM4-204ENST00000482728 ATP2B1P20020 1258 aa20.73■□□□□ 0.91
SMIM4-204ENST00000482728 TRMT1LQ7Z2T5 733 aaKnown RBP20.73■□□□□ 0.91
SMIM4-204ENST00000482728 HERVK_113Q902F9 699 aa20.73■□□□□ 0.91
SMIM4-204ENST00000482728 KCNMB3Q9NPA1 279 aa20.73■□□□□ 0.91
SMIM4-204ENST00000482728 SMC3Q9UQE7 1217 aa20.73■□□□□ 0.91
SMIM4-204ENST00000482728 MYH9P35579 1960 aaKnown RBP20.73■□□□□ 0.91
SMIM4-204ENST00000482728 CAND2O75155 1236 aa20.72■□□□□ 0.91
SMIM4-204ENST00000482728 ZNF484Q5JVG2 852 aa20.72■□□□□ 0.91
SMIM4-204ENST00000482728 MARCH8Q5T0T0 291 aa20.72■□□□□ 0.91
SMIM4-204ENST00000482728 SLFN12Q8IYM2 578 aa20.72■□□□□ 0.91
SMIM4-204ENST00000482728 LRCH3Q96II8 777 aa20.72■□□□□ 0.91
SMIM4-204ENST00000482728 NRBP2Q9NSY0 501 aa20.72■□□□□ 0.91
SMIM4-204ENST00000482728 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.71■□□□□ 0.91
SMIM4-204ENST00000482728 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.71■□□□□ 0.91
SMIM4-204ENST00000482728 MBLAC1A4D2B0 266 aaPredicted RBP20.71■□□□□ 0.91
SMIM4-204ENST00000482728 ZBBXA8MT70 800 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms