RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 PPP1R18Q6NYC8 613 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 FOXR2Q6PJQ5 311 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 USP17L6PQ6QN14 398 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 MICALL2Q8IY33 904 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 TSEN2Q8NCE0 465 aaKnown RBP16.39■□□□□ 0.21
ATG4B-220ENST00000482507 CUL5Q93034 780 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 EDEM3Q9BZQ6 932 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 CEP72Q9P209 647 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 FAM198AQ9UFP1 575 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 CNOT7Q9UIV1 285 aaKnown RBP16.39■□□□□ 0.21
ATG4B-220ENST00000482507 PCDHA12Q9UN75 941 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 KIAA1024Q9UPX6 916 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 POTEB3A0JP26 581 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 GOLGA6BA6NDN3 693 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 POTECB2RU33 542 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 POLR2FP61218 127 aaKnown RBP16.39■□□□□ 0.21
ATG4B-220ENST00000482507 SHROOM1Q2M3G4 852 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-220ENST00000482507 HYIQ5T013 277 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 POTEBQ6S5H4 581 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 SCFD1Q8WVM8 642 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 VEZTQ9HBM0 779 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 MYOZ2Q9NPC6 264 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 ASTN2O75129 1339 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-220ENST00000482507 ARFGEF1Q9Y6D6 1849 aa16.39■□□□□ 0.21
ATG4B-220ENST00000482507 WNT10BO00744 389 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 IVLP07476 585 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 STAT3P40763 770 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 TRIM59Q8IWR1 403 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 LRRC27Q9C0I9 530 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 KCTD10Q9H3F6 313 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 PSTPIP2Q9H939 334 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 SERPINB13Q9UIV8 391 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 A0A0U1RQG5 324 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-220ENST00000482507 DDTLA6NHG4 134 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-220ENST00000482507 FAM196BA6NMK8 535 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 ZBTB5O15062 677 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 PLA2G4BP0C869 781 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 SFMBT2Q5VUG0 894 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 NOX5Q96PH1 765 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 P2RX7Q99572 595 aaKnown RBP16.38■□□□□ 0.21
ATG4B-220ENST00000482507 PACSIN1Q9BY11 444 aa16.38■□□□□ 0.21
ATG4B-220ENST00000482507 CYP11B2P19099 503 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 ARSHQ5FYA8 562 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 CCDC181Q5TID7 509 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 SH3BP5LQ7L8J4 393 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 C10orf67Q8IYJ2 551 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 STIM2Q9P246 746 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 A0A087X0T9 212 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 ZSCAN5CA6NGD5 496 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-220ENST00000482507 MARCH6O60337 910 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 MED24O75448 989 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 PALMO75781 387 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 FTCDO95954 541 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 SERPING1P05155 500 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 FAM228BP0C875 321 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 KLRC1P26715 233 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 DNA2P51530 1060 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 CASP5P51878 434 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 MRPL12P52815 198 aaKnown RBP16.37■□□□□ 0.21
ATG4B-220ENST00000482507 ARID5AQ03989 594 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 SEPT2Q15019 361 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 SLC9C1Q4G0N8 1177 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 GPBP1Q86WP2 473 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 CDAN1Q8IWY9 1227 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 TBC1D5Q92609 795 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 TRIM34Q9BYJ4 488 aa16.37■□□□□ 0.21
ATG4B-220ENST00000482507 ZNF70Q9UC06 446 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-220ENST00000482507 NAP1L1P55209 391 aaKnown RBP16.36■□□□□ 0.21
ATG4B-220ENST00000482507 HERC4Q5GLZ8 1057 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-220ENST00000482507 CCDC70Q6NSX1 233 aa16.36■□□□□ 0.21
ATG4B-220ENST00000482507 RNF10Q8N5U6 811 aaKnown RBP16.36■□□□□ 0.21
ATG4B-220ENST00000482507 SYN2Q92777 582 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-220ENST00000482507 CEP63Q96MT8 703 aa16.36■□□□□ 0.21
ATG4B-220ENST00000482507 PACSIN2Q9UNF0 486 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-220ENST00000482507 ANKRD65E5RJM6 399 aa16.36■□□□□ 0.21
ATG4B-220ENST00000482507 ZNF646O15015 1829 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-220ENST00000482507 SHOX2O60902 331 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-220ENST00000482507 GLI1P08151 1106 aa16.36■□□□□ 0.21
ATG4B-220ENST00000482507 EPS15P42566 896 aa16.36■□□□□ 0.21
ATG4B-220ENST00000482507 MARSP56192 900 aaKnown RBP16.36■□□□□ 0.21
ATG4B-220ENST00000482507 ENOX2Q16206 610 aaKnown RBP16.36■□□□□ 0.21
ATG4B-220ENST00000482507 DPY19L2P1Q6NXN4 242 aa16.36■□□□□ 0.21
ATG4B-220ENST00000482507 GOLGA6L1Q8N7Z2 621 aa16.36■□□□□ 0.21
ATG4B-220ENST00000482507 SH3GL2Q99962 352 aa16.36■□□□□ 0.21
ATG4B-220ENST00000482507 EHD4Q9H223 541 aa16.36■□□□□ 0.21
ATG4B-220ENST00000482507 GANQ9H2C0 597 aa16.36■□□□□ 0.21
ATG4B-220ENST00000482507 KCNMB3Q9NPA1 279 aa16.36■□□□□ 0.21
ATG4B-220ENST00000482507 RSPH14Q9UHP6 348 aa16.36■□□□□ 0.21
ATG4B-220ENST00000482507 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.36■□□□□ 0.21
ATG4B-220ENST00000482507 POTEFA5A3E0 1075 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
ATG4B-220ENST00000482507 POTEIP0CG38 1075 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 NAB2Q15742 525 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 POTEGQ6S5H5 508 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 POTEEQ6S8J3 1075 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 ZC3H3Q8IXZ2 948 aaKnown RBP16.35■□□□□ 0.21
ATG4B-220ENST00000482507 FAM133AQ8N9E0 248 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 DNAJC18Q9H819 358 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 EMILIN3Q9NT22 766 aa16.35■□□□□ 0.21
ATG4B-220ENST00000482507 GOLGA6CA6NDK9 693 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms