RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 HOMER1Q86YM7 354 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 STAG2Q8N3U4 1231 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 YME1L1Q96TA2 773 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 PDCD2LQ9BRP1 358 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 RWDD1Q9H446 243 aaPredicted RBP11.97□□□□□ -0.49
SMURF1-204ENST00000480055 CNNM2Q9H8M5 875 aa11.97□□□□□ -0.49
SMURF1-204ENST00000480055 H3BRB1 525 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 GCOM1H8Y6P7 765 aaPredicted RBP11.96□□□□□ -0.49
SMURF1-204ENST00000480055 ZBTB5O15062 677 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 CTSHP09668 335 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 POLR2MP0CAP2 368 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 HOXC8P31273 242 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 IRS1P35568 1242 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 LTBRP36941 435 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 SMAD2Q15796 467 aaKnown RBP11.96□□□□□ -0.49
SMURF1-204ENST00000480055 STOX1Q6ZVD7 989 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 VSIG10LQ86VR7 867 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 TMEM192Q8IY95 271 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 SEPT8Q92599 483 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 TOP1MTQ969P6 601 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 SNX27Q96L92 541 aa11.96□□□□□ -0.49
SMURF1-204ENST00000480055 TUT1Q9H6E5 874 aaKnown RBP11.96□□□□□ -0.49
SMURF1-204ENST00000480055 MAP3K20Q9NYL2 800 aaKnown RBP11.96□□□□□ -0.49
SMURF1-204ENST00000480055 ZDBF2Q9HCK1 2354 aa11.96□□□□□ -0.5
SMURF1-204ENST00000480055 PLXNA3P51805 1871 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.95□□□□□ -0.5
SMURF1-204ENST00000480055 C3orf80F5H4A9 247 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 RGS20O76081 388 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 SMIM10L2AP0DMW4 78 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 SMIM10L2BP0DMW5 78 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 TGFB3P10600 412 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 UBA1P22314 1058 aaKnown RBP11.95□□□□□ -0.5
SMURF1-204ENST00000480055 SP2Q02086 613 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 GHRHRQ02643 423 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 TRAF1Q13077 416 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 CTC1Q2NKJ3 1217 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 HERC4Q5GLZ8 1057 aaPredicted RBP11.95□□□□□ -0.5
SMURF1-204ENST00000480055 RPAINQ86UA6 219 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 CHD1LQ86WJ1 897 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 SPNS2Q8IVW8 549 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 C16orf70Q9BSU1 422 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 DSCC1Q9BVC3 393 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 UPF3BQ9BZI7 483 aaKnown RBP11.95□□□□□ -0.5
SMURF1-204ENST00000480055 CLDND1Q9NY35 253 aa11.95□□□□□ -0.5
SMURF1-204ENST00000480055 FNDC1Q4ZHG4 1894 aaPredicted RBP11.95□□□□□ -0.5
SMURF1-204ENST00000480055 C5orf67F2Z3F1 127 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 OPLAHO14841 1288 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 TREHO43280 583 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 NCK2O43639 380 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 PPP1R11O60927 126 aaPredicted RBP11.94□□□□□ -0.5
SMURF1-204ENST00000480055 CAND2O75155 1236 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 LGALS2P05162 132 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 GNAT1P11488 350 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 TRDNQ13061 729 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 GNPTABQ3T906 1256 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 PLEKHM2Q8IWE5 1019 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 SAMD3Q8N6K7 520 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 IL31RAQ8NI17 732 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 GPKOWQ92917 476 aaPredicted RBP eCLIP11.94□□□□□ -0.5
SMURF1-204ENST00000480055 MFSD14AQ96MC6 490 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 PIGSQ96S52 555 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 POP1Q99575 1024 aaKnown RBP11.94□□□□□ -0.5
SMURF1-204ENST00000480055 USP26Q9BXU7 913 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 OSBPL7Q9BZF2 842 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 RNPEPQ9H4A4 650 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 MAD2L2Q9UI95 211 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 USP34Q70CQ2 3546 aa11.94□□□□□ -0.5
SMURF1-204ENST00000480055 ERICH2A1L162 156 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 MBTPS2O43462 519 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 LINC00271P0C7V0 271 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 SP4Q02446 784 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 NEDD9Q14511 834 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 UTP14CQ5TAP6 766 aaKnown RBP11.93□□□□□ -0.5
SMURF1-204ENST00000480055 CYFIP1Q7L576 1253 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 METTL3Q86U44 580 aaKnown RBP11.93□□□□□ -0.5
SMURF1-204ENST00000480055 PIBF1Q8WXW3 757 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 APBB2Q92870 758 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 ZFRQ96KR1 1074 aaKnown RBP11.93□□□□□ -0.5
SMURF1-204ENST00000480055 IFIH1Q9BYX4 1025 aaKnown RBP11.93□□□□□ -0.5
SMURF1-204ENST00000480055 LMAN2LQ9H0V9 348 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 RC3H2Q9HBD1 1191 aaKnown RBP11.93□□□□□ -0.5
SMURF1-204ENST00000480055 SLC24A3Q9HC58 644 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 SETD4Q9NVD3 440 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 RTEL1Q9NZ71 1219 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 MUTYHQ9UIF7 546 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
SMURF1-204ENST00000480055 PALM3A6NDB9 673 aaPredicted RBP11.92□□□□□ -0.5
SMURF1-204ENST00000480055 IFIT3O14879 490 aaKnown RBP11.92□□□□□ -0.5
SMURF1-204ENST00000480055 TBX10O75333 385 aa11.92□□□□□ -0.5
SMURF1-204ENST00000480055 CTNNB1P35222 781 aa11.92□□□□□ -0.5
SMURF1-204ENST00000480055 ARHGAP4P98171 946 aa11.92□□□□□ -0.5
SMURF1-204ENST00000480055 DLX2Q07687 328 aaPredicted RBP11.92□□□□□ -0.5
SMURF1-204ENST00000480055 HYAL1Q12794 435 aa11.92□□□□□ -0.5
SMURF1-204ENST00000480055 SMAD4Q13485 552 aaKnown RBP11.92□□□□□ -0.5
SMURF1-204ENST00000480055 RNF135Q8IUD6 432 aa11.92□□□□□ -0.5
SMURF1-204ENST00000480055 FIBCD1Q8N539 461 aa11.92□□□□□ -0.5
SMURF1-204ENST00000480055 PRSS33Q8NF86 280 aa11.92□□□□□ -0.5
SMURF1-204ENST00000480055 MTMR8Q96EF0 704 aa11.92□□□□□ -0.5
SMURF1-204ENST00000480055 PHOX2BQ99453 314 aa11.92□□□□□ -0.5
SMURF1-204ENST00000480055 C11orf84Q9BUA3 381 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms