RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 GTF3C6Q969F1 213 aa21.35■■□□□ 1.01
SREBF1-212ENST00000478616 TIFAQ96CG3 184 aa21.35■■□□□ 1.01
SREBF1-212ENST00000478616 PHF20Q9BVI0 1012 aa21.35■■□□□ 1.01
SREBF1-212ENST00000478616 SMARCAD1Q9H4L7 1026 aa21.35■■□□□ 1.01
SREBF1-212ENST00000478616 ERAP1Q9NZ08 941 aa21.35■■□□□ 1.01
SREBF1-212ENST00000478616 SLC4A7Q9Y6M7 1214 aa21.35■■□□□ 1.01
SREBF1-212ENST00000478616 NRCAMQ92823 1304 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 IPO5O00410 1097 aaKnown RBP21.34■■□□□ 1.01
SREBF1-212ENST00000478616 ZNF76P36508 570 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 NEK4P51957 841 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 DEFB103AP81534 67 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 MGAT3Q09327 533 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 GRIK4Q16099 956 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 EARS2Q5JPH6 523 aaKnown RBP21.34■■□□□ 1.01
SREBF1-212ENST00000478616 BLIDQ8IZY5 108 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 NSUN7Q8NE18 718 aaKnown RBP21.34■■□□□ 1.01
SREBF1-212ENST00000478616 OXER1Q8TDS5 423 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 TBCKQ8TEA7 893 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 TRAPPC12Q8WVT3 735 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 MYLIPQ8WY64 445 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 MBOAT7Q96N66 472 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 SDF4Q9BRK5 362 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 NKX2-4Q9H2Z4 354 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 ZNF576Q9H609 170 aa21.34■■□□□ 1.01
SREBF1-212ENST00000478616 ZBBXA8MT70 800 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 ZBTB42B2RXF5 422 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 MSH4O15457 936 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 TDP2O95551 362 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 CHRNA1P02708 482 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 CTSHP09668 335 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 INSRRP14616 1297 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 WDR5P61964 334 aaKnown RBP21.33■■□□□ 1.01
SREBF1-212ENST00000478616 PPFIA1Q13136 1202 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 PRR16Q569H4 304 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 FAM26DQ5JW98 314 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 MCTP2Q6DN12 878 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 PLPPR4Q7Z2D5 763 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 SPRED2Q7Z698 418 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 BICD2Q8TD16 824 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 GLG1Q92896 1179 aa21.33■■□□□ 1.01
SREBF1-212ENST00000478616 FTOQ9C0B1 505 aaKnown RBP eCLIP21.33■■□□□ 1.01
SREBF1-212ENST00000478616 CYP3A7-CYP3A51PA0A087WV96 503 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 RSPH10B2B2RC85 870 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 JAK2O60674 1132 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 RSPH10BP0C881 870 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 ATP2A2P16615 1042 aaKnown RBP21.32■■□□□ 1
SREBF1-212ENST00000478616 CYP3A7P24462 503 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 USP11P51784 963 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 PLEKHG4Q58EX7 1191 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 CNKSR3Q6P9H4 555 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 B3GNT9Q6UX72 402 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 RPAINQ86UA6 219 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 DBF4BQ8NFT6 615 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 ZNF577Q9BSK1 485 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 TRANK1O15050 2925 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 PRUNE2Q8WUY3 3088 aa21.32■■□□□ 1
SREBF1-212ENST00000478616 FAM205CA6NFA0 338 aa21.31■■□□□ 1
SREBF1-212ENST00000478616 BAIAP3O94812 1187 aa21.31■■□□□ 1
SREBF1-212ENST00000478616 STAT5BP51692 787 aa21.31■■□□□ 1
SREBF1-212ENST00000478616 SLC5A5Q92911 643 aa21.31■■□□□ 1
SREBF1-212ENST00000478616 TNFRSF25Q93038 417 aa21.31■■□□□ 1
SREBF1-212ENST00000478616 COL4A6Q14031 1691 aa21.31■■□□□ 1
SREBF1-212ENST00000478616 REV3LO60673 3130 aa21.31■■□□□ 1
SREBF1-212ENST00000478616 SETQ01105 290 aaPredicted RBP21.3■■□□□ 1
SREBF1-212ENST00000478616 ADGRE1Q14246 886 aa21.3■■□□□ 1
SREBF1-212ENST00000478616 ANKRD1Q15327 319 aa21.3■■□□□ 1
SREBF1-212ENST00000478616 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.3■■□□□ 1
SREBF1-212ENST00000478616 HERC6Q8IVU3 1022 aa21.3■■□□□ 1
SREBF1-212ENST00000478616 FAM177A1Q8N128 213 aaPredicted RBP21.3■■□□□ 1
SREBF1-212ENST00000478616 MTIF3Q9H2K0 278 aaKnown RBP21.3■■□□□ 1
SREBF1-212ENST00000478616 ORC3Q9UBD5 711 aaPredicted RBP21.3■■□□□ 1
SREBF1-212ENST00000478616 TUBE1Q9UJT0 475 aa21.3■■□□□ 1
SREBF1-212ENST00000478616 PCDHA11Q9Y5I1 949 aa21.3■■□□□ 1
SREBF1-212ENST00000478616 SPTBN5Q9NRC6 3674 aaKnown RBP21.3■■□□□ 1
SREBF1-212ENST00000478616 UNC80Q8N2C7 3258 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 COL4A4P53420 1690 aaPredicted RBP21.29■■□□□ 1
SREBF1-212ENST00000478616 LCHNA4D1U4 455 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 SLC37A4O43826 429 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 CAND2O75155 1236 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 PARNO95453 639 aaKnown RBP21.29■■□□□ 1
SREBF1-212ENST00000478616 GNAT1P11488 350 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 ACTN1P12814 892 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 IGBP1P78318 339 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 INF2Q27J81 1249 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 Q4G0T1 1027 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 ZNF746Q6NUN9 644 aaPredicted RBP21.29■■□□□ 1
SREBF1-212ENST00000478616 CPLX2Q6PUV4 134 aaKnown RBP21.29■■□□□ 1
SREBF1-212ENST00000478616 ETNPPLQ8TBG4 499 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 PHOSPHO2Q8TCD6 241 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 DNAJB3Q8WWF6 145 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 SLC9A7Q96T83 725 aa21.29■■□□□ 1
SREBF1-212ENST00000478616 MAFBQ9Y5Q3 323 aaPredicted RBP21.29■■□□□ 1
SREBF1-212ENST00000478616 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.28■■□□□ 1
SREBF1-212ENST00000478616 ZNF862O60290 1169 aa21.28■■□□□ 1
SREBF1-212ENST00000478616 PSMD10O75832 226 aa21.28■■□□□ 1
SREBF1-212ENST00000478616 CDKL5O76039 1030 aa21.28■■□□□ 1
SREBF1-212ENST00000478616 RAB30Q15771 203 aa21.28■■□□□ 1
SREBF1-212ENST00000478616 GALNT17Q6IS24 598 aa21.28■■□□□ 1
SREBF1-212ENST00000478616 SWSAP1Q6NVH7 229 aa21.28■■□□□ 1
SREBF1-212ENST00000478616 ATP8B4Q8TF62 1192 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms