RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 CYP2B6P20813 491 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 ACTN2P35609 894 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 MAP9Q49MG5 647 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
PCCB-214ENST00000478469 SAMD3Q8N6K7 520 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 ZC3H15Q8WU90 426 aaKnown RBP13.16□□□□□ -0.3
PCCB-214ENST00000478469 SEPT1Q8WYJ6 367 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 TRIM9Q9C026 710 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 FZD1Q9UP38 647 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 FSD2A1L4K1 749 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 CTAGE15A4D2H0 777 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 NFKBIEO00221 500 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 AFPP02771 609 aaKnown RBP13.16□□□□□ -0.3
PCCB-214ENST00000478469 CTAGE8P0CG41 777 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 GNAT1P11488 350 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 PRCPP42785 496 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 PPATQ06203 517 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 HLTFQ14527 1009 aaKnown RBP eCLIP13.16□□□□□ -0.3
PCCB-214ENST00000478469 TAF12Q16514 161 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 KIAA0753Q2KHM9 967 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 CTAGE6Q86UF2 777 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 CTAGE4Q8IX94 777 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 SCFD2Q8WU76 684 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 PRIMPOLQ96LW4 560 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 PPP1R16BQ96T49 567 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 APOL6Q9BWW8 343 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 PKD1L3Q7Z443 1732 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 EIF3JO75822 258 aaKnown RBP13.16□□□□□ -0.3
PCCB-214ENST00000478469 TMCO3Q6UWJ1 677 aa13.16□□□□□ -0.3
PCCB-214ENST00000478469 XPOTO43592 962 aaKnown RBP13.15□□□□□ -0.3
PCCB-214ENST00000478469 CYTH3O43739 400 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 DSG3P32926 999 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 MAPK6Q16659 721 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 LIN9Q5TKA1 542 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 JAKMIP2Q96AA8 810 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 NFIBO00712 420 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 ATP1A3P13637 1013 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 SREBF1P36956 1147 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 MYL7Q01449 175 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 XKR3Q5GH77 459 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 SLFN12LQ6IEE8 588 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 METTL16Q86W50 562 aaKnown RBP13.15□□□□□ -0.3
PCCB-214ENST00000478469 RPS6KC1Q96S38 1066 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 MTRQ99707 1265 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 FERMT1Q9BQL6 677 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 GSTTP1A0A1W2PQM5 241 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 FGRP09769 529 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.32e-7■■□□□ 12.4
PCCB-214ENST00000478469 HERVK_113P62684 666 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 VGLL4Q14135 290 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 MOXD1Q6UVY6 613 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 GUF1Q8N442 669 aaKnown RBP13.15□□□□□ -0.3
PCCB-214ENST00000478469 NT5C1BQ96P26 610 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 MROH8Q9H579 483 aa13.15□□□□□ -0.3
PCCB-214ENST00000478469 YWHABP31946 246 aaKnown RBP13.14□□□□□ -0.31
PCCB-214ENST00000478469 SNX16P57768 344 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 SMC1AQ14683 1233 aaKnown RBP13.14□□□□□ -0.31
PCCB-214ENST00000478469 IL17RAQ96F46 866 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 NUDT12Q9BQG2 462 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 CENPHQ9H3R5 247 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 PLCH1Q4KWH8 1693 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 ZNF541Q9H0D2 1346 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 GLTPD2A6NH11 291 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 SLC16A4O15374 487 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 RPA1P27694 616 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 CLCN1P35523 988 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 PTPAQ15257 358 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 TATDN1Q6P1N9 297 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 CATSPER4Q7RTX7 472 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 PPP1R9BQ96SB3 815 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 MMS19Q96T76 1030 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.14□□□□□ -0.31
PCCB-214ENST00000478469 COL18A1P39060 1754 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 SPOPO43791 374 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 ATF7P17544 494 aaPredicted RBP13.14□□□□□ -0.31
PCCB-214ENST00000478469 GABPAQ06546 454 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 NFX1Q12986 1120 aaKnown RBP13.14□□□□□ -0.31
PCCB-214ENST00000478469 RAET1EQ8TD07 263 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 IFIH1Q9BYX4 1025 aaKnown RBP13.14□□□□□ -0.31
PCCB-214ENST00000478469 SPATC1LQ9H0A9 340 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
PCCB-214ENST00000478469 CTTNBP2NLQ9P2B4 639 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 ZNF233A6NK53 670 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 VWA5AO00534 786 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 STAM2O75886 525 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 MXI1P50539 228 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 GRIN1Q05586 938 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 KCNB1Q14721 858 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 SMAP1Q8IYB5 467 aaPredicted RBP13.14□□□□□ -0.31
PCCB-214ENST00000478469 GPRASP2Q96D09 838 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 NDST4Q9H3R1 872 aa13.14□□□□□ -0.31
PCCB-214ENST00000478469 DENND3A2RUS2 1198 aa13.13□□□□□ -0.31
PCCB-214ENST00000478469 SLC37A4O43826 429 aa13.13□□□□□ -0.31
PCCB-214ENST00000478469 CASP14P31944 242 aa13.13□□□□□ -0.31
PCCB-214ENST00000478469 TOB1P50616 345 aaPredicted RBP13.13□□□□□ -0.31
PCCB-214ENST00000478469 TFAMQ00059 246 aaKnown RBP13.13□□□□□ -0.31
PCCB-214ENST00000478469 ZBTB33Q86T24 672 aa13.13□□□□□ -0.31
PCCB-214ENST00000478469 SH2D3AQ9BRG2 576 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms