RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 SERTAD1Q9UHV2 236 aa10.43□□□□□ -0.74
PGK1-204ENST00000477335 IGKV6D-21A0A0A0MT36 114 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 TMEM150BA6NC51 233 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 MYADML2A6NDP7 307 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 WDR64B1ANS9 1081 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 GALR2O43603 387 aaPredicted RBP10.42□□□□□ -0.74
PGK1-204ENST00000477335 ZNF202O95125 648 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 GH1P01241 217 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 HMGCRP04035 888 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 INHAP05111 366 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 SUPT20HL2P0C7V6 817 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 ATP4AP20648 1035 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 UBA7P41226 1012 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 SYKP43405 635 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 TNFAIP2Q03169 654 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 NEDD9Q14511 834 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 ZRSR1Q15695 479 aaKnown RBP10.42□□□□□ -0.74
PGK1-204ENST00000477335 KLHL40Q2TBA0 621 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 IQSEC1Q6DN90 963 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 KCNV1Q6PIU1 500 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 CCDC73Q6ZRK6 1079 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 TRIM50Q86XT4 487 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 DHX37Q8IY37 1157 aaKnown RBP10.42□□□□□ -0.74
PGK1-204ENST00000477335 PXYLP1Q8TE99 480 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 SH3TC2Q8TF17 1288 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 AFG1LQ8WV93 481 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 EMID1Q96A84 441 aaPredicted RBP10.42□□□□□ -0.74
PGK1-204ENST00000477335 MS4A3Q96HJ5 214 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 SPATA33Q96N06 139 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 POLR3CQ9BUI4 534 aaPredicted RBP10.42□□□□□ -0.74
PGK1-204ENST00000477335 FAM13BQ9NYF5 915 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 PTPN22Q9Y2R2 807 aa10.42□□□□□ -0.74
PGK1-204ENST00000477335 IGSF9BQ9UPX0 1349 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.41□□□□□ -0.74
PGK1-204ENST00000477335 E9PMD0 336 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 LGR5O75473 907 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 GABBR2O75899 941 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 RPA1P27694 616 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 CASP1P29466 404 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 JAK3P52333 1124 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 MDM2Q00987 491 aaPredicted RBP10.41□□□□□ -0.74
PGK1-204ENST00000477335 KRT79Q5XKE5 535 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 SWSAP1Q6NVH7 229 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 CAVIN1Q6NZI2 390 aaKnown RBP10.41□□□□□ -0.74
PGK1-204ENST00000477335 KRBA2Q6ZNG9 492 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 SH3RF1Q7Z6J0 888 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 TLK2Q86UE8 772 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 TRMT44Q8IYL2 757 aaKnown RBP10.41□□□□□ -0.74
PGK1-204ENST00000477335 SLAIN1Q8ND83 568 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 OR6J1Q8NGC5 347 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 STAMQ92783 540 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 ERCC4Q92889 916 aaPredicted RBP10.41□□□□□ -0.74
PGK1-204ENST00000477335 LXNQ9BS40 222 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 RAB34Q9BZG1 259 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 CLSTN2Q9H4D0 955 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 MLXIPQ9HAP2 919 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 TUFT1Q9NNX1 390 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 DDX19AQ9NUU7 478 aaKnown RBP10.41□□□□□ -0.74
PGK1-204ENST00000477335 GABBR1Q9UBS5 961 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 NRBP1Q9UHY1 535 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 FAM184BQ9ULE4 1060 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 KIAA1024Q9UPX6 916 aa10.41□□□□□ -0.74
PGK1-204ENST00000477335 DYNC1LI2O43237 492 aaPredicted RBP10.4□□□□□ -0.74
PGK1-204ENST00000477335 MBD3O95983 291 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 P4HBP07237 508 aaKnown RBP10.4□□□□□ -0.74
PGK1-204ENST00000477335 MMP3P08254 477 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 HOXD8P13378 290 aaPredicted RBP10.4□□□□□ -0.74
PGK1-204ENST00000477335 AKR1A1P14550 325 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 SFNP31947 248 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 GRK4P32298 578 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 TCF7P36402 384 aaPredicted RBP10.4□□□□□ -0.74
PGK1-204ENST00000477335 STAT6P42226 847 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 PRMT2P55345 433 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 LAMC2Q13753 1193 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 MCM6Q14566 821 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 CAMK4Q16566 473 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 UTP14CQ5TAP6 766 aaKnown RBP10.4□□□□□ -0.74
PGK1-204ENST00000477335 RRAGBQ5VZM2 374 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 MIS18BP1Q6P0N0 1132 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 TPH2Q8IWU9 490 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 SMAP1Q8IYB5 467 aaPredicted RBP10.4□□□□□ -0.74
PGK1-204ENST00000477335 GIMAP8Q8ND71 665 aaPredicted RBP10.4□□□□□ -0.74
PGK1-204ENST00000477335 RDM1Q8NG50 284 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 PPTC7Q8NI37 304 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 PIGOQ8TEQ8 1089 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 RAD54LQ92698 747 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 TRPC6Q9Y210 931 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 SAMM50Q9Y512 469 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 PCDHA10Q9Y5I2 948 aa10.4□□□□□ -0.74
PGK1-204ENST00000477335 SYNRGQ9UMZ2 1314 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 KDM3AQ9Y4C1 1321 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 NKRFO15226 690 aaKnown RBP eCLIP10.39□□□□□ -0.75
PGK1-204ENST00000477335 SEPT4O43236 478 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 SLC26A4O43511 780 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 LYPLA2O95372 231 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 PSAPP07602 524 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 SLFN14P0C7P3 912 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 ZNF286BP0CG31 522 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 PTMSP20962 102 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 TXLNAP40222 546 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms