RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 HP1BP3Q5SSJ5 553 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 NUTM2GQ5VZR2 741 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 CPLX2Q6PUV4 134 aaKnown RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 PODNQ7Z5L7 613 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 LUZP1Q86V48 1076 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 MCF2L2Q86YR7 1114 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 RTF1Q92541 710 aaKnown RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 CUL5Q93034 780 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 SPDL1Q96EA4 605 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 WDR89Q96FK6 387 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 SEC16BQ96JE7 1060 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 PRAM1Q96QH2 718 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 YIPF2Q9BWQ6 316 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 NACA2Q9H009 215 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 KCNF1Q9H3M0 494 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 ST7Q9NRC1 585 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 ORC3Q9UBD5 711 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 DKK3Q9UBP4 350 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 FMN2Q9NZ56 1722 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 BCL9O00512 1426 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 YTHDC2Q9H6S0 1430 aaKnown RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 CCDC151A5D8V7 595 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 PLIN1O60240 522 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 LUC7L3O95232 432 aaKnown RBP8.11□□□□□ -1.11
GPNMB-209ENST00000474157 SELPP16109 830 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 RPL17P18621 184 aaKnown RBP8.11□□□□□ -1.11
GPNMB-209ENST00000474157 MX1P20591 662 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 RANBP1P43487 201 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 CDK8P49336 464 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 USP11P51784 963 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 NEK2P51955 445 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 ZBED6P86452 979 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 CNGA3Q16281 694 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 Q4G0T1 1027 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 CAPRIN2Q6IMN6 1127 aaKnown RBP8.11□□□□□ -1.11
GPNMB-209ENST00000474157 TTLL7Q6ZT98 887 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 HDXQ7Z353 690 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 ARMC9Q7Z3E5 817 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 REC114Q7Z4M0 266 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 SLITRK4Q8IW52 837 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 PEX5LQ8IYB4 626 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 GALNT15Q8N3T1 639 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 CCHCR1Q8TD31 782 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 USP33Q8TEY7 942 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 BRD8Q9H0E9 1235 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 CIDEBQ9UHD4 219 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 TMED5Q9Y3A6 229 aa8.11□□□□□ -1.11
GPNMB-209ENST00000474157 CNTNAP5Q8WYK1 1306 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 TARSL2A2RTX5 802 aaKnown RBP8.1□□□□□ -1.11
GPNMB-209ENST00000474157 MTRF1O75570 445 aaKnown RBP8.1□□□□□ -1.11
GPNMB-209ENST00000474157 TBC1D8O95759 1140 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 PYGLP06737 847 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 ELNP15502 786 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 SOX9P48436 509 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 MCM2P49736 904 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 HTRA3P83110 453 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 MPP3Q13368 585 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 TUBB2AQ13885 445 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 ZNF827Q17R98 1081 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 KIF4BQ2VIQ3 1234 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 CCDC152Q4G0S7 254 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 ARHGAP29Q52LW3 1261 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 PRRT3Q5FWE3 981 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 WIPI1Q5MNZ9 446 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-209ENST00000474157 SH2D4BQ5SQS7 431 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 CEP85LQ5SZL2 805 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 CC2D1AQ6P1N0 951 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-209ENST00000474157 ACAD11Q709F0 780 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 SKAP1Q86WV1 359 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 TEX9Q8N6V9 391 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 PARD3BQ8TEW8 1205 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 LMBR1Q8WVP7 490 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 GIMAP1Q8WWP7 306 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 ZBTB10Q96DT7 871 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 TMX3Q96JJ7 454 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 C16orf45Q96MC5 204 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-209ENST00000474157 SH3GL1Q99961 368 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 GORASP1Q9BQQ3 440 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 PAGR1Q9BTK6 254 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 WDR18Q9BV38 432 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 TUBB2BQ9BVA1 445 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 RUSC1Q9BVN2 902 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 HOXC10Q9NYD6 342 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 NOP53Q9NZM5 478 aaKnown RBP8.1□□□□□ -1.11
GPNMB-209ENST00000474157 DAAM1Q9Y4D1 1078 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 PCDHGC5Q9Y5F6 944 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.1□□□□□ -1.11
GPNMB-209ENST00000474157 ATP7BP35670 1465 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 RGPD3A6NKT7 1758 aaPredicted RBP8.1□□□□□ -1.11
GPNMB-209ENST00000474157 RGPD4Q7Z3J3 1758 aa8.1□□□□□ -1.11
GPNMB-209ENST00000474157 TTC41PQ6P2S7 1318 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 PHLPP2Q6ZVD8 1323 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 GOLGA6L7A0A1B0GV03 622 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 EME2A4GXA9 379 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-209ENST00000474157 AOC2O75106 756 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 KIAA0754O94854 1291 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 IGHDP01880 384 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 TROVE2P10155 538 aaKnown RBP eCLIP8.09□□□□□ -1.11
GPNMB-209ENST00000474157 HOXD10P28358 340 aa8.09□□□□□ -1.11
GPNMB-209ENST00000474157 CNGA1P29973 690 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms