RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 TRMT13Q9NUP7 481 aaKnown RBP13.99□□□□□ -0.17
DDX56-209ENST00000473924 GABBR1Q9UBS5 961 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 GTF2IRD1Q9UHL9 959 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 ZMYND8Q9ULU4 1186 aaPredicted RBP13.99□□□□□ -0.17
DDX56-209ENST00000473924 TRPC6Q9Y210 931 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 PCDHB6Q9Y5E3 794 aa13.99□□□□□ -0.17
DDX56-209ENST00000473924 IGKV6D-21A0A0A0MT36 114 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 C17orf102A2RUQ5 167 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 CD4P01730 458 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 OR52Z1P0C646 297 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 SMIM10L2AP0DMW4 78 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 SMIM10L2BP0DMW5 78 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 GNAT1P11488 350 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 PPP2R5CQ13362 524 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 NCAPH2Q6IBW4 605 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 GDF6Q6KF10 455 aaPredicted RBP13.98□□□□□ -0.17
DDX56-209ENST00000473924 AFAP1L1Q8TED9 768 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 TMEM60Q9H2L4 133 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 PDLIM7Q9NR12 457 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 VAV3Q9UKW4 847 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 MTMR6Q9Y217 621 aa13.98□□□□□ -0.17
DDX56-209ENST00000473924 H0YGN5 161 aa13.97□□□□□ -0.17
DDX56-209ENST00000473924 RAG1P15918 1043 aa13.97□□□□□ -0.17
DDX56-209ENST00000473924 PPFIA1Q13136 1202 aa13.97□□□□□ -0.17
DDX56-209ENST00000473924 PLCB4Q15147 1175 aa13.97□□□□□ -0.17
DDX56-209ENST00000473924 TMEM266Q2M3C6 531 aa13.97□□□□□ -0.17
DDX56-209ENST00000473924 TRMT1LQ7Z2T5 733 aaKnown RBP13.97□□□□□ -0.17
DDX56-209ENST00000473924 SH3RF1Q7Z6J0 888 aa13.97□□□□□ -0.17
DDX56-209ENST00000473924 ATP6V0A1Q93050 837 aa13.97□□□□□ -0.17
DDX56-209ENST00000473924 MTMR9Q96QG7 549 aa13.97□□□□□ -0.17
DDX56-209ENST00000473924 ZSCAN16Q9H4T2 348 aaPredicted RBP13.97□□□□□ -0.17
DDX56-209ENST00000473924 SETD4Q9NVD3 440 aa13.97□□□□□ -0.17
DDX56-209ENST00000473924 NRCAMQ92823 1304 aa13.96□□□□□ -0.17
DDX56-209ENST00000473924 DNAH12Q6ZR08 3092 aa13.96□□□□□ -0.17
DDX56-209ENST00000473924 POTEB3A0JP26 581 aa13.96□□□□□ -0.17
DDX56-209ENST00000473924 LAD1O00515 517 aa13.96□□□□□ -0.17
DDX56-209ENST00000473924 CYP2C9P11712 490 aa13.96□□□□□ -0.17
DDX56-209ENST00000473924 TECP42680 631 aa13.96□□□□□ -0.17
DDX56-209ENST00000473924 RESTQ13127 1097 aa13.96□□□□□ -0.17
DDX56-209ENST00000473924 PTGDRQ13258 359 aa13.96□□□□□ -0.17
DDX56-209ENST00000473924 POTEBQ6S5H4 581 aa13.96□□□□□ -0.17
DDX56-209ENST00000473924 B3GNT9Q6UX72 402 aa13.96□□□□□ -0.17
DDX56-209ENST00000473924 LBHD1Q9BQE6 289 aaPredicted RBP13.96□□□□□ -0.17
DDX56-209ENST00000473924 PPP1R12CQ9BZL4 782 aa13.96□□□□□ -0.17
DDX56-209ENST00000473924 HIPK3Q9H422 1215 aa13.96□□□□□ -0.17
DDX56-209ENST00000473924 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.96□□□□□ -0.17
DDX56-209ENST00000473924 MAFBQ9Y5Q3 323 aaPredicted RBP13.96□□□□□ -0.17
DDX56-209ENST00000473924 TNRC18O15417 2968 aaPredicted RBP13.95□□□□□ -0.18
DDX56-209ENST00000473924 IGSF9BQ9UPX0 1349 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 TRIM43BA6NCK2 446 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 RRN3P2A6NIE6 340 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 EML1O00423 815 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 KIAA0355O15063 1070 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 HBP1O60381 514 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 DKC1O60832 514 aaKnown RBP eCLIP13.95□□□□□ -0.18
DDX56-209ENST00000473924 INSRRP14616 1297 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 IGBP1P78318 339 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 ZNF200P98182 395 aaPredicted RBP13.95□□□□□ -0.18
DDX56-209ENST00000473924 EPHA7Q15375 998 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 GRIK4Q16099 956 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 FOXD4L5Q5VV16 416 aaPredicted RBP13.95□□□□□ -0.18
DDX56-209ENST00000473924 CCDC155Q8N6L0 562 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 BANK1Q8NDB2 785 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 ATP8B4Q8TF62 1192 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 FOXD4L4Q8WXT5 416 aaPredicted RBP13.95□□□□□ -0.18
DDX56-209ENST00000473924 TRIM43Q96BQ3 446 aaPredicted RBP13.95□□□□□ -0.18
DDX56-209ENST00000473924 FAM167AQ96KS9 214 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 NRBP2Q9NSY0 501 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 DAXXQ9UER7 740 aaPredicted RBP13.95□□□□□ -0.18
DDX56-209ENST00000473924 TBX21Q9UL17 535 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 CEP131Q9UPN4 1083 aa13.95□□□□□ -0.18
DDX56-209ENST00000473924 POTEMA6NI47 508 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 TREHO43280 583 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 BMP15O95972 392 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 TIMP1P01033 207 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 OATP04181 439 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 P4HBP07237 508 aaKnown RBP13.94□□□□□ -0.18
DDX56-209ENST00000473924 ANP32AP39687 249 aaKnown RBP13.94□□□□□ -0.18
DDX56-209ENST00000473924 QARSP47897 775 aaKnown RBP13.94□□□□□ -0.18
DDX56-209ENST00000473924 PSMC5P62195 406 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 PRKCEQ02156 737 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 SPIRE1Q08AE8 756 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 PTK7Q13308 1070 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 BFSP2Q13515 415 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 HIC1Q14526 733 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 UGCGQ16739 394 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 PDE4DIPQ5VU43 2346 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 DTHD1Q6ZMT9 781 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 C4orf32Q8N8J7 132 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 RETREG2Q8NC44 543 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 LMBR1Q8WVP7 490 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 BBXQ8WY36 941 aaPredicted RBP13.94□□□□□ -0.18
DDX56-209ENST00000473924 RAB34Q9BZG1 259 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 TUBE1Q9UJT0 475 aa13.94□□□□□ -0.18
DDX56-209ENST00000473924 MYH9P35579 1960 aaKnown RBP13.94□□□□□ -0.18
DDX56-209ENST00000473924 KAT6AQ92794 2004 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 ZNF862O60290 1169 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 ZSCAN22P10073 491 aaPredicted RBP13.93□□□□□ -0.18
DDX56-209ENST00000473924 ATP4AP20648 1035 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 HOXC8P31273 242 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms