RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 NLRC5Q86WI3 1866 aa20.56■□□□□ 0.88
SNX4-204ENST00000473417 EMSYQ7Z589 1322 aa20.55■□□□□ 0.88
SNX4-204ENST00000473417 TCF7P36402 384 aaPredicted RBP20.55■□□□□ 0.88
SNX4-204ENST00000473417 UTP14CQ5TAP6 766 aaKnown RBP20.55■□□□□ 0.88
SNX4-204ENST00000473417 WASF1Q92558 559 aa20.55■□□□□ 0.88
SNX4-204ENST00000473417 JADE2Q9NQC1 790 aa20.55■□□□□ 0.88
SNX4-204ENST00000473417 GJB4Q9NTQ9 266 aa20.55■□□□□ 0.88
SNX4-204ENST00000473417 ABHD14A-ACY1A0A1B0GW23 586 aa20.54■□□□□ 0.88
SNX4-204ENST00000473417 XBP1P17861 261 aa20.54■□□□□ 0.88
SNX4-204ENST00000473417 THPOP40225 353 aa20.54■□□□□ 0.88
SNX4-204ENST00000473417 ADAM17P78536 824 aa20.54■□□□□ 0.88
SNX4-204ENST00000473417 DEFB103AP81534 67 aa20.54■□□□□ 0.88
SNX4-204ENST00000473417 IL27Q8NEV9 243 aa20.54■□□□□ 0.88
SNX4-204ENST00000473417 LMBR1Q8WVP7 490 aa20.54■□□□□ 0.88
SNX4-204ENST00000473417 SYMPKQ92797 1274 aaKnown RBP20.54■□□□□ 0.88
SNX4-204ENST00000473417 SETD4Q9NVD3 440 aa20.54■□□□□ 0.88
SNX4-204ENST00000473417 PCDHA4Q9UN74 947 aa20.54■□□□□ 0.88
SNX4-204ENST00000473417 TTC28Q96AY4 2481 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 RSPH10B2B2RC85 870 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 KIF28PB7ZC32 967 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 MAFGO15525 162 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 EFCAB14O75071 495 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 CAND2O75155 1236 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 LGR5O75473 907 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 ARHGEF15O94989 841 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 RSPH10BP0C881 870 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 GNAT1P11488 350 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 IGFBP4P22692 258 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 FOSBP53539 338 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 TAP1Q03518 808 aa20.53■□□□□ 0.88
SNX4-204ENST00000473417 PRRC2BQ5JSZ5 2229 aaKnown RBP20.53■□□□□ 0.88
SNX4-204ENST00000473417 GSTTP1A0A1W2PQM5 241 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 RBAK-RBAKDNI3L0D1 243 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 TLL1O43897 1013 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 SREBF1P36956 1147 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 ARHGAP4P98171 946 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 MKRN4PQ13434 485 aaPredicted RBP20.52■□□□□ 0.88
SNX4-204ENST00000473417 IKBKEQ14164 716 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 NPY5RQ15761 445 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 MCTP2Q6DN12 878 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 TMCO2Q7Z6W1 182 aaPredicted RBP20.52■□□□□ 0.88
SNX4-204ENST00000473417 BLIDQ8IZY5 108 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 SEPT1Q8WYJ6 367 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 MXRA8Q9BRK3 442 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 LLPHQ9BRT6 129 aaKnown RBP20.52■□□□□ 0.88
SNX4-204ENST00000473417 PHF20Q9BVI0 1012 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 PKD2L1Q9P0L9 805 aa20.52■□□□□ 0.88
SNX4-204ENST00000473417 MYH9P35579 1960 aaKnown RBP20.52■□□□□ 0.87
SNX4-204ENST00000473417 RALGAPA2Q2PPJ7 1873 aa20.52■□□□□ 0.87
SNX4-204ENST00000473417 NRCAMQ92823 1304 aa20.52■□□□□ 0.87
SNX4-204ENST00000473417 XIRP2A4UGR9 3374 aa20.51■□□□□ 0.87
SNX4-204ENST00000473417 ZNF76P36508 570 aa20.51■□□□□ 0.87
SNX4-204ENST00000473417 MCM2P49736 904 aa20.51■□□□□ 0.87
SNX4-204ENST00000473417 PLEKHG4Q58EX7 1191 aa20.51■□□□□ 0.87
SNX4-204ENST00000473417 GALNT17Q6IS24 598 aa20.51■□□□□ 0.87
SNX4-204ENST00000473417 FAM177A1Q8N128 213 aaPredicted RBP20.51■□□□□ 0.87
SNX4-204ENST00000473417 DAGLBQ8NCG7 672 aa20.51■□□□□ 0.87
SNX4-204ENST00000473417 CYP2W1Q8TAV3 490 aa20.51■□□□□ 0.87
SNX4-204ENST00000473417 PPM1EQ8WY54 764 aa20.51■□□□□ 0.87
SNX4-204ENST00000473417 TMX3Q96JJ7 454 aa20.51■□□□□ 0.87
SNX4-204ENST00000473417 KCNH7Q9NS40 1196 aa20.51■□□□□ 0.87
SNX4-204ENST00000473417 COL4A6Q14031 1691 aa20.51■□□□□ 0.87
SNX4-204ENST00000473417 GJB5O95377 273 aa20.5■□□□□ 0.87
SNX4-204ENST00000473417 TJAP1Q5JTD0 557 aa20.5■□□□□ 0.87
SNX4-204ENST00000473417 DBF4BQ8NFT6 615 aa20.5■□□□□ 0.87
SNX4-204ENST00000473417 CERS4Q9HA82 394 aa20.5■□□□□ 0.87
SNX4-204ENST00000473417 JPH1Q9HDC5 661 aaPredicted RBP20.5■□□□□ 0.87
SNX4-204ENST00000473417 PRDM6Q9NQX0 595 aa20.5■□□□□ 0.87
SNX4-204ENST00000473417 ERAP1Q9NZ08 941 aa20.5■□□□□ 0.87
SNX4-204ENST00000473417 NFASCO94856 1347 aa20.5■□□□□ 0.87
SNX4-204ENST00000473417 LCHNA4D1U4 455 aa20.49■□□□□ 0.87
SNX4-204ENST00000473417 EPOPA6NHQ4 379 aa20.49■□□□□ 0.87
SNX4-204ENST00000473417 M0R2N6 131 aa20.49■□□□□ 0.87
SNX4-204ENST00000473417 CTSHP09668 335 aa20.49■□□□□ 0.87
SNX4-204ENST00000473417 POU3F3P20264 500 aaPredicted RBP20.49■□□□□ 0.87
SNX4-204ENST00000473417 CEP55Q53EZ4 464 aa20.49■□□□□ 0.87
SNX4-204ENST00000473417 CRYGNQ8WXF5 182 aa20.49■□□□□ 0.87
SNX4-204ENST00000473417 SLC9A2Q9UBY0 812 aa20.49■□□□□ 0.87
SNX4-204ENST00000473417 RFXAPO00287 272 aa20.48■□□□□ 0.87
SNX4-204ENST00000473417 CYP3A4P08684 503 aa20.48■□□□□ 0.87
SNX4-204ENST00000473417 PPFIA1Q13136 1202 aa20.48■□□□□ 0.87
SNX4-204ENST00000473417 CCDC85BQ15834 202 aaPredicted RBP20.48■□□□□ 0.87
SNX4-204ENST00000473417 FAM26DQ5JW98 314 aa20.48■□□□□ 0.87
SNX4-204ENST00000473417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.48■□□□□ 0.87
SNX4-204ENST00000473417 SPRED2Q7Z698 418 aa20.48■□□□□ 0.87
SNX4-204ENST00000473417 OXER1Q8TDS5 423 aa20.48■□□□□ 0.87
SNX4-204ENST00000473417 ATXN2LQ8WWM7 1075 aaKnown RBP20.48■□□□□ 0.87
SNX4-204ENST00000473417 ARNTL2Q8WYA1 636 aa20.48■□□□□ 0.87
SNX4-204ENST00000473417 ZBED2Q9BTP6 218 aa20.48■□□□□ 0.87
SNX4-204ENST00000473417 OSBPL7Q9BZF2 842 aa20.48■□□□□ 0.87
SNX4-204ENST00000473417 SMARCAD1Q9H4L7 1026 aa20.48■□□□□ 0.87
SNX4-204ENST00000473417 THEGQ9P2T0 379 aa20.48■□□□□ 0.87
SNX4-204ENST00000473417 FAM86B1E9PN63 330 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 FAM86B2P0C5J1 330 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 ARP10275 920 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 MARK3P27448 753 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 HMGN5P82970 282 aaKnown RBP20.47■□□□□ 0.87
SNX4-204ENST00000473417 ITGB3BPQ13352 177 aaPredicted RBP20.47■□□□□ 0.87
SNX4-204ENST00000473417 TRIM29Q14134 588 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 GRIK4Q16099 956 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms