RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 CCDC155Q8N6L0 562 aa17.13■□□□□ 0.33
CALD1-215ENST00000472096 NSUN7Q8NE18 718 aaKnown RBP17.13■□□□□ 0.33
CALD1-215ENST00000472096 CAGE1Q8TC20 777 aa17.13■□□□□ 0.33
CALD1-215ENST00000472096 TMC2Q8TDI7 906 aa17.13■□□□□ 0.33
CALD1-215ENST00000472096 SEPT1Q8WYJ6 367 aa17.13■□□□□ 0.33
CALD1-215ENST00000472096 ORC3Q9UBD5 711 aaPredicted RBP17.13■□□□□ 0.33
CALD1-215ENST00000472096 ZNF200P98182 395 aaPredicted RBP17.12■□□□□ 0.33
CALD1-215ENST00000472096 AFAP1L1Q8TED9 768 aa17.12■□□□□ 0.33
CALD1-215ENST00000472096 VWCEQ96DN2 955 aa17.12■□□□□ 0.33
CALD1-215ENST00000472096 PHF20Q9BVI0 1012 aa17.12■□□□□ 0.33
CALD1-215ENST00000472096 KCNJ14Q9UNX9 436 aa17.12■□□□□ 0.33
CALD1-215ENST00000472096 C17orf102A2RUQ5 167 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 EDIL3O43854 480 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 LGR5O75473 907 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 FDPSP14324 419 aaKnown RBP17.11■□□□□ 0.33
CALD1-215ENST00000472096 XBP1P17861 261 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 ACTR2P61160 394 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 PTK7Q13308 1070 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 TRIM71Q2Q1W2 868 aaKnown RBP17.11■□□□□ 0.33
CALD1-215ENST00000472096 ZNF365Q70YC5 407 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 RETREG2Q8NC44 543 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 TBCKQ8TEA7 893 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 WASF1Q92558 559 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 WNT8BQ93098 351 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 LENG9Q96B70 501 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 GJB4Q9NTQ9 266 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 LIMCH1Q9UPQ0 1083 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 LOXHD1Q8IVV2 1947 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 MICAL3Q7RTP6 2002 aa17.11■□□□□ 0.33
CALD1-215ENST00000472096 DDX39AO00148 427 aaKnown RBP17.1■□□□□ 0.33
CALD1-215ENST00000472096 IPO5O00410 1097 aaKnown RBP17.1■□□□□ 0.33
CALD1-215ENST00000472096 DHX15O43143 795 aaKnown RBP17.1■□□□□ 0.33
CALD1-215ENST00000472096 JAK2O60674 1132 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 PFKMP08237 780 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 IQCF3P0C7M6 154 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 RFC2P35250 354 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 PRR16Q569H4 304 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 PPP1R15BQ5SWA1 713 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 RASIP1Q5U651 963 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 GPR153Q6NV75 609 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 SERINC5Q86VE9 423 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 RPUSD2Q8IZ73 545 aaKnown RBP17.1■□□□□ 0.33
CALD1-215ENST00000472096 GLG1Q92896 1179 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 ATP6V0A1Q93050 837 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 PCYT2Q99447 389 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 ZNF577Q9BSK1 485 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 RNPEPQ9H4A4 650 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 SMARCAD1Q9H4L7 1026 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 ERAP1Q9NZ08 941 aa17.1■□□□□ 0.33
CALD1-215ENST00000472096 C2orf72A6NCS6 295 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 CCNE2O96020 404 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 CKBP12277 381 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 SELPP16109 830 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 MARK3P27448 753 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 USP11P51784 963 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 NONOQ15233 471 aaKnown RBP eCLIP17.09■□□□□ 0.33
CALD1-215ENST00000472096 LRRC8DQ7L1W4 858 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 KRT25Q7Z3Z0 450 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 DEFB128Q7Z7B8 93 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 LMBR1Q8WVP7 490 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 HERVK_113Q902F9 699 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 UIMC1Q96RL1 719 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 EVPLQ92817 2033 aa17.09■□□□□ 0.33
CALD1-215ENST00000472096 NRCAMQ92823 1304 aa17.08■□□□□ 0.32
CALD1-215ENST00000472096 TREHO43280 583 aa17.08■□□□□ 0.32
CALD1-215ENST00000472096 ATG7O95352 703 aa17.08■□□□□ 0.32
CALD1-215ENST00000472096 FGBP02675 491 aa17.08■□□□□ 0.32
CALD1-215ENST00000472096 ADAM17P78536 824 aa17.08■□□□□ 0.32
CALD1-215ENST00000472096 SMAD3P84022 425 aaKnown RBP17.08■□□□□ 0.32
CALD1-215ENST00000472096 DSG2Q14126 1118 aa17.08■□□□□ 0.32
CALD1-215ENST00000472096 RABEP1Q15276 862 aa17.08■□□□□ 0.32
CALD1-215ENST00000472096 CCDC83Q8IWF9 413 aa17.08■□□□□ 0.32
CALD1-215ENST00000472096 AZI2Q9H6S1 392 aa17.08■□□□□ 0.32
CALD1-215ENST00000472096 UPF2Q9HAU5 1272 aaKnown RBP17.08■□□□□ 0.32
CALD1-215ENST00000472096 TBC1D22BQ9NU19 505 aa17.08■□□□□ 0.32
CALD1-215ENST00000472096 IGKV6D-21A0A0A0MT36 114 aa17.07■□□□□ 0.32
CALD1-215ENST00000472096 CCDC194A0A1B0GVG4 234 aa17.07■□□□□ 0.32
CALD1-215ENST00000472096 MSH4O15457 936 aa17.07■□□□□ 0.32
CALD1-215ENST00000472096 TDP2O95551 362 aa17.07■□□□□ 0.32
CALD1-215ENST00000472096 GNAT1P11488 350 aa17.07■□□□□ 0.32
CALD1-215ENST00000472096 PPFIA1Q13136 1202 aa17.07■□□□□ 0.32
CALD1-215ENST00000472096 INF2Q27J81 1249 aa17.07■□□□□ 0.32
CALD1-215ENST00000472096 TRAF7Q6Q0C0 670 aa17.07■□□□□ 0.32
CALD1-215ENST00000472096 MOXD1Q6UVY6 613 aa17.07■□□□□ 0.32
CALD1-215ENST00000472096 TMEM92Q6UXU6 159 aa17.07■□□□□ 0.32
CALD1-215ENST00000472096 OTOP2Q7RTS6 562 aa17.07■□□□□ 0.32
CALD1-215ENST00000472096 OXER1Q8TDS5 423 aa17.07■□□□□ 0.32
CALD1-215ENST00000472096 MTIF3Q9H2K0 278 aaKnown RBP17.07■□□□□ 0.32
CALD1-215ENST00000472096 SH2B1Q9NRF2 756 aaPredicted RBP17.07■□□□□ 0.32
CALD1-215ENST00000472096 CXXC1Q9P0U4 656 aaPredicted RBP17.07■□□□□ 0.32
CALD1-215ENST00000472096 CYP3A7-CYP3A51PA0A087WV96 503 aa17.06■□□□□ 0.32
CALD1-215ENST00000472096 PARNO95453 639 aaKnown RBP17.06■□□□□ 0.32
CALD1-215ENST00000472096 CYP3A7P24462 503 aa17.06■□□□□ 0.32
CALD1-215ENST00000472096 STAT5BP51692 787 aa17.06■□□□□ 0.32
CALD1-215ENST00000472096 KRT76Q01546 638 aa17.06■□□□□ 0.32
CALD1-215ENST00000472096 GPNMBQ14956 572 aa17.06■□□□□ 0.32
CALD1-215ENST00000472096 GRIK4Q16099 956 aa17.06■□□□□ 0.32
CALD1-215ENST00000472096 Q4G0T1 1027 aa17.06■□□□□ 0.32
CALD1-215ENST00000472096 ZNF618Q5T7W0 954 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms