RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 SLC26A2P50443 739 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 CCL23P55773 120 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 PPIGQ13427 754 aaKnown RBP eCLIP17.16■□□□□ 0.341e-7■■■■□ 24.9
ABCF3-208ENST00000471226 CUL4AQ13619 759 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 TRIM71Q2Q1W2 868 aaKnown RBP17.16■□□□□ 0.34
ABCF3-208ENST00000471226 LRCH2Q5VUJ6 765 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 MIS18BP1Q6P0N0 1132 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 C16orf59Q7L2K0 433 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 SERINC5Q86VE9 423 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 CCDC60Q8IWA6 550 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-208ENST00000471226 ATP6V0A1Q93050 837 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 GJA10Q969M2 543 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 TEKT3Q9BXF9 490 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 KCNMB3Q9NPA1 279 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 TCEAL9Q9UHQ7 104 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 KIF3AQ9Y496 699 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 PCDHA10Q9Y5I2 948 aa17.16■□□□□ 0.34
ABCF3-208ENST00000471226 TBX3O15119 743 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 TREHO43280 583 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 GNAT1P11488 350 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 MARK3P27448 753 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 GJB2P29033 226 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 PLCB4Q15147 1175 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 SHHQ15465 462 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 FAM160B1Q5W0V3 765 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 SWSAP1Q6NVH7 229 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 CCDC155Q8N6L0 562 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 LMBR1Q8WVP7 490 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 WNT8BQ93098 351 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 VWCEQ96DN2 955 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 FAM20AQ96MK3 541 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 UNC45AQ9H3U1 944 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 IL23AQ9NPF7 189 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 ZNF302Q9NR11 478 aa17.15■□□□□ 0.34
ABCF3-208ENST00000471226 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.15■□□□□ 0.34
ABCF3-208ENST00000471226 MAFBQ9Y5Q3 323 aaPredicted RBP17.15■□□□□ 0.34
ABCF3-208ENST00000471226 WDR64B1ANS9 1081 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 WNT7AO00755 349 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 BACH1O14867 736 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 PSAPP07602 524 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 IQCF3P0C7M6 154 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 SFNP31947 248 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 PPFIA1Q13136 1202 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 GRIK4Q16099 956 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 C9orf50Q5SZB4 431 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 RETREG2Q8NC44 543 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 RDM1Q8NG50 284 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 HAS1Q92839 578 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.33
ABCF3-208ENST00000471226 SCLYQ96I15 445 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 DISC1Q9NRI5 854 aa17.14■□□□□ 0.33
ABCF3-208ENST00000471226 KIF28PB7ZC32 967 aa17.13■□□□□ 0.33
ABCF3-208ENST00000471226 CKBP12277 381 aa17.13■□□□□ 0.33
ABCF3-208ENST00000471226 INSRRP14616 1297 aa17.13■□□□□ 0.33
ABCF3-208ENST00000471226 ATP4AP20648 1035 aa17.13■□□□□ 0.33
ABCF3-208ENST00000471226 U2AF2P26368 475 aaKnown RBP eCLIP17.13■□□□□ 0.33
ABCF3-208ENST00000471226 JAK3P52333 1124 aa17.13■□□□□ 0.33
ABCF3-208ENST00000471226 LRIT3Q3SXY7 679 aa17.13■□□□□ 0.33
ABCF3-208ENST00000471226 TMEM240Q5SV17 173 aa17.13■□□□□ 0.33
ABCF3-208ENST00000471226 MARCH8Q5T0T0 291 aa17.13■□□□□ 0.33
ABCF3-208ENST00000471226 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
ABCF3-208ENST00000471226 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■□□ 17.6
ABCF3-208ENST00000471226 SMC3Q9UQE7 1217 aa17.13■□□□□ 0.33
ABCF3-208ENST00000471226 SAMM50Q9Y512 469 aa17.13■□□□□ 0.33
ABCF3-208ENST00000471226 LOXHD1Q8IVV2 1947 aa17.13■□□□□ 0.33
ABCF3-208ENST00000471226 POTEB3A0JP26 581 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 MBLAC1A4D2B0 266 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-208ENST00000471226 RRN3P2A6NIE6 340 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 ACRP10323 421 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 SELPP16109 830 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 RFC2P35250 354 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 PPP2R5CQ13362 524 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 PDXDC2PQ6P474 469 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 TRAF7Q6Q0C0 670 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 POTEBQ6S5H4 581 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 NOSTRINQ8IVI9 506 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 RPUSD2Q8IZ73 545 aaKnown RBP17.12■□□□□ 0.33
ABCF3-208ENST00000471226 ATP8B4Q8TF62 1192 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 GABBR1Q9UBS5 961 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 VAV3Q9UKW4 847 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 TRPC6Q9Y210 931 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 IGSF9BQ9UPX0 1349 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 SIP14410 1827 aa17.12■□□□□ 0.33
ABCF3-208ENST00000471226 LAMA3Q16787 3333 aa17.11■□□□□ 0.33
ABCF3-208ENST00000471226 CHMP2AO43633 222 aa17.11■□□□□ 0.33
ABCF3-208ENST00000471226 HBP1O60381 514 aa17.11■□□□□ 0.33
ABCF3-208ENST00000471226 PARNO95453 639 aaKnown RBP17.11■□□□□ 0.33
ABCF3-208ENST00000471226 GPNMBQ14956 572 aa17.11■□□□□ 0.33
ABCF3-208ENST00000471226 ZNF618Q5T7W0 954 aa17.11■□□□□ 0.33
ABCF3-208ENST00000471226 PSRC1Q6PGN9 363 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-208ENST00000471226 ZNF365Q70YC5 407 aa17.11■□□□□ 0.33
ABCF3-208ENST00000471226 LRRC8DQ7L1W4 858 aa17.11■□□□□ 0.33
ABCF3-208ENST00000471226 MIER3Q7Z3K6 550 aa17.11■□□□□ 0.33
ABCF3-208ENST00000471226 RPAINQ86UA6 219 aa17.11■□□□□ 0.33
ABCF3-208ENST00000471226 SLFN12Q8IYM2 578 aa17.11■□□□□ 0.33
ABCF3-208ENST00000471226 SNX21Q969T3 373 aa17.11■□□□□ 0.33
ABCF3-208ENST00000471226 TUBE1Q9UJT0 475 aa17.11■□□□□ 0.33
ABCF3-208ENST00000471226 CAND2O75155 1236 aa17.1■□□□□ 0.33
ABCF3-208ENST00000471226 BAG4O95429 457 aaKnown RBP17.1■□□□□ 0.33
ABCF3-208ENST00000471226 FGBP02675 491 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms