RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 DISC1Q9NRI5 854 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 MAFBQ9Y5Q3 323 aaPredicted RBP22.62■■□□□ 1.21
NPHP4-206ENST00000468253 K7ELQ4 463 aaPredicted RBP22.61■■□□□ 1.21
NPHP4-206ENST00000468253 CYP2C9P11712 490 aa22.61■■□□□ 1.21
NPHP4-206ENST00000468253 SWSAP1Q6NVH7 229 aa22.61■■□□□ 1.21
NPHP4-206ENST00000468253 CCDC155Q8N6L0 562 aa22.61■■□□□ 1.21
NPHP4-206ENST00000468253 RETREG2Q8NC44 543 aa22.61■■□□□ 1.21
NPHP4-206ENST00000468253 PPP1R13LQ8WUF5 828 aa22.61■■□□□ 1.21
NPHP4-206ENST00000468253 HAS1Q92839 578 aa22.61■■□□□ 1.21
NPHP4-206ENST00000468253 UIMC1Q96RL1 719 aa22.61■■□□□ 1.21
NPHP4-206ENST00000468253 UBE2OQ9C0C9 1292 aaKnown RBP22.61■■□□□ 1.21
NPHP4-206ENST00000468253 ZNF302Q9NR11 478 aa22.61■■□□□ 1.21
NPHP4-206ENST00000468253 BACH1O14867 736 aa22.6■■□□□ 1.21
NPHP4-206ENST00000468253 CYP2C18P33260 490 aa22.6■■□□□ 1.21
NPHP4-206ENST00000468253 FPGSQ05932 587 aa22.6■■□□□ 1.21
NPHP4-206ENST00000468253 GNL2Q13823 731 aaKnown RBP22.6■■□□□ 1.21
NPHP4-206ENST00000468253 HIC1Q14526 733 aa22.6■■□□□ 1.21
NPHP4-206ENST00000468253 LARP1BQ659C4 914 aaKnown RBP22.6■■□□□ 1.21
NPHP4-206ENST00000468253 SERINC5Q86VE9 423 aa22.6■■□□□ 1.21
NPHP4-206ENST00000468253 ATP6V0A1Q93050 837 aa22.6■■□□□ 1.21
NPHP4-206ENST00000468253 SETD4Q9NVD3 440 aa22.6■■□□□ 1.21
NPHP4-206ENST00000468253 H3BQV1 296 aa22.59■■□□□ 1.21
NPHP4-206ENST00000468253 MARCH6O60337 910 aa22.59■■□□□ 1.21
NPHP4-206ENST00000468253 HBP1O60381 514 aa22.59■■□□□ 1.21
NPHP4-206ENST00000468253 PARNO95453 639 aaKnown RBP22.59■■□□□ 1.21
NPHP4-206ENST00000468253 PDCP20941 246 aa22.59■■□□□ 1.21
NPHP4-206ENST00000468253 PPP2R5CQ13362 524 aa22.59■■□□□ 1.21
NPHP4-206ENST00000468253 PPIGQ13427 754 aaKnown RBP eCLIP22.59■■□□□ 1.214e-7■■■□□ 15.6
NPHP4-206ENST00000468253 PLCB4Q15147 1175 aa22.59■■□□□ 1.21
NPHP4-206ENST00000468253 PDXDC2PQ6P474 469 aa22.59■■□□□ 1.21
NPHP4-206ENST00000468253 CCDC60Q8IWA6 550 aaPredicted RBP22.59■■□□□ 1.21
NPHP4-206ENST00000468253 UNC45AQ9H3U1 944 aa22.59■■□□□ 1.21
NPHP4-206ENST00000468253 SAMM50Q9Y512 469 aa22.59■■□□□ 1.21
NPHP4-206ENST00000468253 POTEB3A0JP26 581 aa22.58■■□□□ 1.21
NPHP4-206ENST00000468253 ZNF200P98182 395 aaPredicted RBP22.58■■□□□ 1.21
NPHP4-206ENST00000468253 PPFIA1Q13136 1202 aa22.58■■□□□ 1.21
NPHP4-206ENST00000468253 POTEBQ6S5H4 581 aa22.58■■□□□ 1.21
NPHP4-206ENST00000468253 RPAINQ86UA6 219 aa22.58■■□□□ 1.21
NPHP4-206ENST00000468253 RPUSD2Q8IZ73 545 aaKnown RBP22.58■■□□□ 1.21
NPHP4-206ENST00000468253 ATP8B4Q8TF62 1192 aa22.58■■□□□ 1.21
NPHP4-206ENST00000468253 MTMR9Q96QG7 549 aa22.58■■□□□ 1.21
NPHP4-206ENST00000468253 PPP1R12CQ9BZL4 782 aa22.58■■□□□ 1.21
NPHP4-206ENST00000468253 RANBP2P49792 3224 aaKnown RBP22.57■■□□□ 1.2
NPHP4-206ENST00000468253 MBLAC1A4D2B0 266 aaPredicted RBP22.57■■□□□ 1.2
NPHP4-206ENST00000468253 TREHO43280 583 aa22.57■■□□□ 1.2
NPHP4-206ENST00000468253 CAND2O75155 1236 aa22.57■■□□□ 1.2
NPHP4-206ENST00000468253 RPLP2P05387 115 aaKnown RBP22.57■■□□□ 1.2
NPHP4-206ENST00000468253 INSRRP14616 1297 aa22.57■■□□□ 1.2
NPHP4-206ENST00000468253 MARK3P27448 753 aa22.57■■□□□ 1.2
NPHP4-206ENST00000468253 RFC2P35250 354 aa22.57■■□□□ 1.2
NPHP4-206ENST00000468253 GRIK4Q16099 956 aa22.57■■□□□ 1.2
NPHP4-206ENST00000468253 TRIM71Q2Q1W2 868 aaKnown RBP22.57■■□□□ 1.2
NPHP4-206ENST00000468253 MIER3Q7Z3K6 550 aa22.57■■□□□ 1.2
NPHP4-206ENST00000468253 POTEDQ86YR6 584 aa22.57■■□□□ 1.2
NPHP4-206ENST00000468253 LMBR1Q8WVP7 490 aa22.57■■□□□ 1.2
NPHP4-206ENST00000468253 DHX38Q92620 1227 aaKnown RBP22.57■■□□□ 1.2
NPHP4-206ENST00000468253 GJA10Q969M2 543 aa22.57■■□□□ 1.2
NPHP4-206ENST00000468253 VAV3Q9UKW4 847 aa22.57■■□□□ 1.2
NPHP4-206ENST00000468253 NOL7Q9UMY1 257 aaKnown RBP22.57■■□□□ 1.2
NPHP4-206ENST00000468253 KIF28PB7ZC32 967 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 NEMFO60524 1076 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 IQCF3P0C7M6 154 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 ATP4AP20648 1035 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 CALCRLQ16602 461 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 ZNF484Q5JVG2 852 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 MARCH8Q5T0T0 291 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 TAF2Q6P1X5 1199 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 BBXQ8WY36 941 aaPredicted RBP22.56■■□□□ 1.2
NPHP4-206ENST00000468253 FAM167AQ96KS9 214 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 WNT8AQ9H1J5 351 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 IL23AQ9NPF7 189 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 NRBP2Q9NSY0 501 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 GABBR1Q9UBS5 961 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 PCDHA12Q9UN75 941 aa22.56■■□□□ 1.2
NPHP4-206ENST00000468253 CKBP12277 381 aa22.55■■□□□ 1.2
NPHP4-206ENST00000468253 CSF2RAP15509 400 aa22.55■■□□□ 1.2
NPHP4-206ENST00000468253 SELPP16109 830 aa22.55■■□□□ 1.2
NPHP4-206ENST00000468253 CCL23P55773 120 aa22.55■■□□□ 1.2
NPHP4-206ENST00000468253 HSCBQ8IWL3 235 aa22.55■■□□□ 1.2
NPHP4-206ENST00000468253 TDHQ8IZJ6 230 aa22.55■■□□□ 1.2
NPHP4-206ENST00000468253 TRPC6Q9Y210 931 aa22.55■■□□□ 1.2
NPHP4-206ENST00000468253 UMODL1Q5DID0 1318 aa22.55■■□□□ 1.2
NPHP4-206ENST00000468253 WNT7AO00755 349 aa22.54■■□□□ 1.2
NPHP4-206ENST00000468253 PFKMP08237 780 aa22.54■■□□□ 1.2
NPHP4-206ENST00000468253 EPHA7Q15375 998 aa22.54■■□□□ 1.2
NPHP4-206ENST00000468253 HABP4Q5JVS0 413 aaKnown RBP22.54■■□□□ 1.2
NPHP4-206ENST00000468253 TTC38Q5R3I4 469 aa22.54■■□□□ 1.2
NPHP4-206ENST00000468253 MCTP1Q6DN14 999 aa22.54■■□□□ 1.2
NPHP4-206ENST00000468253 C16orf59Q7L2K0 433 aa22.54■■□□□ 1.2
NPHP4-206ENST00000468253 PCDHA2Q9Y5H9 948 aa22.54■■□□□ 1.2
NPHP4-206ENST00000468253 COL1A2P08123 1366 aa22.53■■□□□ 1.2
NPHP4-206ENST00000468253 CHMP2AO43633 222 aa22.53■■□□□ 1.2
NPHP4-206ENST00000468253 DKC1O60832 514 aaKnown RBP eCLIP22.53■■□□□ 1.24e-7■■■■■ 40.2
NPHP4-206ENST00000468253 PDIA4P13667 645 aaKnown RBP22.53■■□□□ 1.2
NPHP4-206ENST00000468253 ATP2B1P20020 1258 aa22.53■■□□□ 1.2
NPHP4-206ENST00000468253 MCM7P33993 719 aa22.53■■□□□ 1.2
NPHP4-206ENST00000468253 TOB1P50616 345 aaPredicted RBP22.53■■□□□ 1.2
NPHP4-206ENST00000468253 EPHB4P54760 987 aa22.53■■□□□ 1.2
NPHP4-206ENST00000468253 ZNF174Q15697 407 aa22.53■■□□□ 1.2
NPHP4-206ENST00000468253 RILPL1Q5EBL4 403 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms