RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	DTNB	O60941	627 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	PARN	O95453	639 aa	Known RBP	13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	LGALS2	P05162	132 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	SELP	P16109	830 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	ITGB5	P18084	799 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	HOXC8	P31273	242 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	NASP	P49321	788 aa	Predicted RBP	13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	ADCY7	P51828	1080 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	HIC1	Q14526	733 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	GPNMB	Q14956	572 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	GRIN2C	Q14957	1233 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	NPY5R	Q15761	445 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	RAB30	Q15771	203 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	TRIM71	Q2Q1W2	868 aa	Known RBP	13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	TYW1B	Q6NUM6	668 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	SLC17A8	Q8NDX2	589 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	MYLIP	Q8WY64	445 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	TNFRSF25	Q93038	417 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	CDHR1	Q96JP9	859 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	NAP1L4	Q99733	375 aa	Known RBP	13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	TUT1	Q9H6E5	874 aa	Known RBP	13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	RIC8A	Q9NPQ8	531 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	GJB4	Q9NTQ9	266 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	MSRA	Q9UJ68	235 aa		13.64	□□□□□ -0.23
CTNS-205	ENST00000467663	CCDC194	A0A1B0GVG4	234 aa		13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	MAFG	O15525	162 aa		13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	FOS	P01100	380 aa	Predicted RBP	13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	CKB	P12277	381 aa		13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	ACTN1	P12814	892 aa		13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	KCNA2	P16389	499 aa		13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	UBE2H	P62256	183 aa		13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	ZNF200	P98182	395 aa	Predicted RBP	13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	AP3B2	Q13367	1082 aa		13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	LRRC8D	Q7L1W4	858 aa		13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	REXO1	Q8N1G1	1221 aa	Known RBP	13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	EHMT1	Q9H9B1	1298 aa		13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.63	□□□□□ -0.23
CTNS-205	ENST00000467663	MYH7B	A7E2Y1	1941 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	C17orf102	A2RUQ5	167 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	ZBBX	A8MT70	800 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	KIF28P	B7ZC32	967 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	ATP9A	O75110	1047 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	PPP6R2	O75170	966 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	CXCL10	P02778	98 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	SMIM10L2A	P0DMW4	78 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	SMIM10L2B	P0DMW5	78 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	ATP2A2	P16615	1042 aa	Known RBP	13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	MTMR1	Q13613	665 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	TRAF7	Q6Q0C0	670 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	SERINC5	Q86VE9	423 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	PHOSPHO2	Q8TCD6	241 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	LEO1	Q8WVC0	666 aa	Predicted RBP	13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	WNT8B	Q93098	351 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	JADE2	Q9NQC1	790 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	LMBRD1	Q9NUN5	540 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	YBX2	Q9Y2T7	364 aa	Known RBP	13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	TELO2	Q9Y4R8	837 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	PCDHA11	Q9Y5I1	949 aa		13.62	□□□□□ -0.23
CTNS-205	ENST00000467663	GOLGA6L4	A6NEF3	574 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	LAD1	O00515	517 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	PRPF40A	O75400	957 aa	Known RBP	13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	BAIAP3	O94812	1187 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	FOSL2	P15408	326 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	CLK2	P49760	499 aa	Known RBP	13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	NR5A1	Q13285	461 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	SLC39A14	Q15043	492 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	STK38	Q15208	465 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	NONO	Q15233	471 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	LINC00301	Q8NCQ3	95 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	USP28	Q96RU2	1077 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	SLC9A7	Q96T83	725 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	MXRA8	Q9BRK3	442 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	NKX2-4	Q9H2Z4	354 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	RNPEP	Q9H4A4	650 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	COL6A3	P12111	3177 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	TANC1	Q9C0D5	1861 aa		13.61	□□□□□ -0.23
CTNS-205	ENST00000467663	GSTTP1	A0A1W2PQM5	241 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	NBN	O60934	754 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	TCF7	P36402	384 aa	Predicted RBP	13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	RABGGTB	P53611	331 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	SP4	Q02446	784 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	SCN5A	Q14524	2016 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	SF3A1	Q15459	793 aa	Known RBP	13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	KLHL40	Q2TBA0	621 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	ZNF618	Q5T7W0	954 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	UTP14C	Q5TAP6	766 aa	Known RBP	13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	TRIM50	Q86XT4	487 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	MAFA	Q8NHW3	353 aa	Predicted RBP	13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	OXER1	Q8TDS5	423 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	SEPT1	Q8WYJ6	367 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	ATP6V0A1	Q93050	837 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	ANO3	Q9BYT9	981 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	SLC28A3	Q9HAS3	691 aa		13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	TFIP11	Q9UBB9	837 aa	Known RBP	13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	ZNF215	Q9UL58	517 aa	Predicted RBP	13.6	□□□□□ -0.23
CTNS-205	ENST00000467663	SPTLC2	O15270	562 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	TREH	O43280	583 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	GNAT1	P11488	350 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	GCFC2	P16383	781 aa	Known RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms