RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 TRMT1LQ7Z2T5 733 aaKnown RBP12.04□□□□□ -0.48
NUP188-204ENST00000467044 CATSPER3Q86XQ3 398 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 NEK9Q8TD19 979 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 GLG1Q92896 1179 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 EMID1Q96A84 441 aaPredicted RBP12.04□□□□□ -0.48
NUP188-204ENST00000467044 DHX58Q96C10 678 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 PNMA5Q96PV4 448 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 HSD17B14Q9BPX1 270 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 POLR3CQ9BUI4 534 aaPredicted RBP12.04□□□□□ -0.48
NUP188-204ENST00000467044 NT5C3AQ9H0P0 336 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 AZI2Q9H6S1 392 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 SPC25Q9HBM1 224 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 TUFT1Q9NNX1 390 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 ZNF302Q9NR11 478 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 DDX19AQ9NUU7 478 aaKnown RBP12.04□□□□□ -0.48
NUP188-204ENST00000467044 DDX20Q9UHI6 824 aaKnown RBP12.04□□□□□ -0.48
NUP188-204ENST00000467044 KIAA1024Q9UPX6 916 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 HPSEQ9Y251 543 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 Q9Y3F1 56 aa12.04□□□□□ -0.48
NUP188-204ENST00000467044 A0A087WWV3 80 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 A0A087X0B3 334 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 POTEFA5A3E0 1075 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 SLC26A4O43511 780 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 DKC1O60832 514 aaKnown RBP eCLIP12.03□□□□□ -0.48
NUP188-204ENST00000467044 NR1I2O75469 434 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 ZNF202O95125 648 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 MBD3O95983 291 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 PGK1P00558 417 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 C6orf222P0C671 652 aaPredicted RBP12.03□□□□□ -0.48
NUP188-204ENST00000467044 SPATA31C1P0DKV0 1188 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 PLCG1P19174 1290 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 CPT1AP50416 773 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 STAT5BP51692 787 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 PSMC5P62195 406 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
NUP188-204ENST00000467044 BEX3Q00994 111 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 ECM1Q16610 540 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 UGCGQ16739 394 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 BRDTQ58F21 947 aaPredicted RBP12.03□□□□□ -0.48
NUP188-204ENST00000467044 PDXDC2PQ6P474 469 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 POTEGQ6S5H5 508 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 CCDC60Q8IWA6 550 aaPredicted RBP12.03□□□□□ -0.48
NUP188-204ENST00000467044 CKAP2LQ8IYA6 745 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 IQUBQ8NA54 791 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 PPTC7Q8NI37 304 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 GPT2Q8TD30 523 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 ATP6V0A1Q93050 837 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 PYM1Q9BRP8 204 aaKnown RBP12.03□□□□□ -0.48
NUP188-204ENST00000467044 LXNQ9BS40 222 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 ZSWIM4Q9H7M6 989 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 XPNPEP3Q9NQH7 507 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 SERTAD1Q9UHV2 236 aa12.03□□□□□ -0.48
NUP188-204ENST00000467044 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.02□□□□□ -0.49
NUP188-204ENST00000467044 FAM237AA0A1B0GTK4 181 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 MSCO60682 206 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 KINO60870 393 aaKnown RBP12.02□□□□□ -0.49
NUP188-204ENST00000467044 PPFIA4O75335 1185 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 MMP3P08254 477 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 MYL3P08590 195 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 GJA9P57773 515 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 DHX8Q14562 1220 aaKnown RBP12.02□□□□□ -0.49
NUP188-204ENST00000467044 MTFR1Q15390 333 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 FSCN1Q16658 493 aaKnown RBP12.02□□□□□ -0.49
NUP188-204ENST00000467044 DGKDQ16760 1214 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 GNASQ5JWF2 1037 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 CEP57L1Q8IYX8 460 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 FMR1NBQ8N0W7 255 aaPredicted RBP12.02□□□□□ -0.49
NUP188-204ENST00000467044 CNNM3Q8NE01 707 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 ENGASEQ8NFI3 743 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 PIGOQ8TEQ8 1089 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 PCYT2Q99447 389 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.02□□□□□ -0.49
NUP188-204ENST00000467044 UNC93B1Q9H1C4 597 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 SMARCAD1Q9H4L7 1026 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 PRDM10Q9NQV6 1147 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 DACT1Q9NYF0 836 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 DNM3Q9UQ16 869 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 SYNRGQ9UMZ2 1314 aa12.02□□□□□ -0.49
NUP188-204ENST00000467044 IGKV6D-21A0A0A0MT36 114 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 A6NJR5 290 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 E9PMD0 336 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 TRAK2O60296 914 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 LGR5O75473 907 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 LGALS2P05162 132 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 SSBP05455 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
NUP188-204ENST00000467044 ZNF286BP0CG31 522 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 CCL5P13501 91 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 MUTP22033 750 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 MARK3P27448 753 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 CHMP4BP1P59074 171 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 PSMC6P62333 389 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 SNW1Q13573 536 aaKnown RBP12.01□□□□□ -0.49
NUP188-204ENST00000467044 SKOR2Q2VWA4 1001 aaPredicted RBP12.01□□□□□ -0.49
NUP188-204ENST00000467044 LONRF3Q496Y0 759 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 TMEM119Q4V9L6 283 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 HYIQ5T013 277 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 KCNK18Q7Z418 384 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 TRIM50Q86XT4 487 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 C4orf19Q8IY42 314 aa12.01□□□□□ -0.49
NUP188-204ENST00000467044 CCDC43Q96MW1 224 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms