RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 MAFBQ9Y5Q3 323 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-205ENST00000466897 KBTBD13C9JR72 458 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 SORBS3O60504 671 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 DKC1O60832 514 aaKnown RBP eCLIP17.06■□□□□ 0.32
NPHP4-205ENST00000466897 P4HBP07237 508 aaKnown RBP17.06■□□□□ 0.32
NPHP4-205ENST00000466897 RPA1P27694 616 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 RGS19P49795 217 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 BEX3Q00994 111 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 KCNA10Q16322 511 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 AXDND1Q5T1B0 1012 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-205ENST00000466897 FAM160B1Q5W0V3 765 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 CCDC60Q8IWA6 550 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-205ENST00000466897 TMEM87AQ8NBN3 555 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 ATP6V0A1Q93050 837 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 CHAMP1Q96JM3 812 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 PCYT2Q99447 389 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 POLR3CQ9BUI4 534 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-205ENST00000466897 KATNAL1Q9BW62 490 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 SMARCAD1Q9H4L7 1026 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 AZI2Q9H6S1 392 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 TUFT1Q9NNX1 390 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 ZNF215Q9UL58 517 aaPredicted RBP17.06■□□□□ 0.32
NPHP4-205ENST00000466897 PHF24Q9UPV7 400 aa17.06■□□□□ 0.32
NPHP4-205ENST00000466897 CCDC85CA6NKD9 419 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 LYPLA2O95372 231 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 ASGR1P07306 291 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 QARSP47897 775 aaKnown RBP17.05■□□□□ 0.32
NPHP4-205ENST00000466897 ME1P48163 572 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 STAT5BP51692 787 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 ACLYP53396 1101 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 PSMC5P62195 406 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 IRX5P78411 483 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-205ENST00000466897 GRIN1Q05586 938 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 HYIQ5T013 277 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 KRT79Q5XKE5 535 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 ADALQ6DHV7 355 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 EIF2AK1Q9BQI3 630 aaKnown RBP17.05■□□□□ 0.32
NPHP4-205ENST00000466897 MTG1Q9BT17 334 aaPredicted RBP17.05■□□□□ 0.32
NPHP4-205ENST00000466897 CCSER1Q9C0I3 900 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 CSRNP2Q9H175 543 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 ZNF302Q9NR11 478 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 ERAP1Q9NZ08 941 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 PCDHA7Q9UN72 937 aa17.05■□□□□ 0.32
NPHP4-205ENST00000466897 KDM3AQ9Y4C1 1321 aa17.04■□□□□ 0.32
NPHP4-205ENST00000466897 H3BRB1 525 aa17.04■□□□□ 0.32
NPHP4-205ENST00000466897 HAS3O00219 553 aa17.04■□□□□ 0.32
NPHP4-205ENST00000466897 BACH1O14867 736 aa17.04■□□□□ 0.32
NPHP4-205ENST00000466897 TFRCP02786 760 aaKnown RBP17.04■□□□□ 0.32
NPHP4-205ENST00000466897 SWSAP1Q6NVH7 229 aa17.04■□□□□ 0.32
NPHP4-205ENST00000466897 C4orf19Q8IY42 314 aa17.04■□□□□ 0.32
NPHP4-205ENST00000466897 KAT2BQ92831 832 aa17.04■□□□□ 0.32
NPHP4-205ENST00000466897 CLIC6Q96NY7 704 aa17.04■□□□□ 0.32
NPHP4-205ENST00000466897 GBP4Q96PP9 640 aa17.04■□□□□ 0.32
NPHP4-205ENST00000466897 MMTAG2Q9BU76 263 aaKnown RBP17.04■□□□□ 0.32
NPHP4-205ENST00000466897 SEZ6LQ9BYH1 1024 aa17.04■□□□□ 0.32
NPHP4-205ENST00000466897 TUT1Q9H6E5 874 aaKnown RBP17.04■□□□□ 0.32
NPHP4-205ENST00000466897 ZSWIM4Q9H7M6 989 aa17.04■□□□□ 0.32
NPHP4-205ENST00000466897 GABBR1Q9UBS5 961 aa17.04■□□□□ 0.32
NPHP4-205ENST00000466897 A0A1W2PQ27 194 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 A0A1W2PQ64 194 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 A0A1W2PQD8 194 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 SLITRK3O94933 977 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 MYL3P08590 195 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 ZNF286BP0CG31 522 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 SPATA31C1P0DKV0 1188 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 MNX1P50219 401 aaPredicted RBP17.03■□□□□ 0.32
NPHP4-205ENST00000466897 PDXDC2PQ6P474 469 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 CATSPER3Q86XQ3 398 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 SNX29Q8TEQ0 813 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 GLG1Q92896 1179 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 FAM167AQ96KS9 214 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 LXNQ9BS40 222 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 NT5C3AQ9H0P0 336 aa17.03■□□□□ 0.32
NPHP4-205ENST00000466897 PP2D1A8MPX8 630 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 ZNF862O60290 1169 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 COL6A1P12109 1028 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.32
NPHP4-205ENST00000466897 TXLNAP40222 546 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 UBA7P41226 1012 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 UGCGQ16739 394 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 UTP14CQ5TAP6 766 aaKnown RBP17.02■□□□□ 0.32
NPHP4-205ENST00000466897 CXCL17Q6UXB2 119 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 CABP7Q86V35 215 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 SESTD1Q86VW0 696 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 TRIM50Q86XT4 487 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 ATP8B4Q8TF62 1192 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 SYMPKQ92797 1274 aaKnown RBP17.02■□□□□ 0.32
NPHP4-205ENST00000466897 DYDC2Q96IM9 177 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 GLT1D1Q96MS3 346 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 GDPD2Q9HCC8 539 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 RGL1Q9NZL6 768 aa17.02■□□□□ 0.32
NPHP4-205ENST00000466897 FAM237AA0A1B0GTK4 181 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 A0A1W2PQ45 241 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-205ENST00000466897 A0A1W2PQY0 241 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 MED24O75448 989 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 OATP04181 439 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 ATP4AP20648 1035 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 CMA1P23946 247 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 CCT6AP40227 531 aaKnown RBP17.01■□□□□ 0.31
NPHP4-205ENST00000466897 PSEN2P49810 448 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms