RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 NPY5RQ15761 445 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 LETM2Q2VYF4 491 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 PIK3AP1Q6ZUJ8 805 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 RETREG2Q8NC44 543 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 DAGLBQ8NCG7 672 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 OXER1Q8TDS5 423 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 CRYGNQ8WXF5 182 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 BRMS1Q9HCU9 246 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 SETD4Q9NVD3 440 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 NFASCO94856 1347 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 FAM205CA6NFA0 338 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 ZBBXA8MT70 800 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 IPO5O00410 1097 aaKnown RBP11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 BACH1O14867 736 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 TREHO43280 583 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 ST18O60284 1047 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 CTSHP09668 335 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 KRT2P35908 639 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 NR5A1Q13285 461 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 BFSP2Q13515 415 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 ZNF365Q70YC5 407 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 OTOP2Q7RTS6 562 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 KRT25Q7Z3Z0 450 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 SESTD1Q86VW0 696 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 TEX2Q8IWB9 1127 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 CCDC155Q8N6L0 562 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 FAM184AQ8NB25 1140 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 DHX38Q92620 1227 aaKnown RBP11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 ATP6V0A1Q93050 837 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 WNT8BQ93098 351 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 CTAGE1Q96RT6 745 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 RNPEPQ9H4A4 650 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 AZI2Q9H6S1 392 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 IL23AQ9NPF7 189 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 RYDENQ9NUL5 291 aaKnown RBP11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 SAMM50Q9Y512 469 aa11.04□□□□□ -0.64
RTFDC1-205ENST00000466260 MICAL3Q7RTP6 2002 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 M0R2N6 131 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 EDIL3O43854 480 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 CD2BP2O95400 341 aaKnown RBP11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 CCNE2O96020 404 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 PPFIA1Q13136 1202 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 EARS2Q5JPH6 523 aaKnown RBP11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 TMEM240Q5SV17 173 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 KRT40Q6A162 431 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 GALNT17Q6IS24 598 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 PSRC1Q6PGN9 363 aaPredicted RBP11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 LRRC8DQ7L1W4 858 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 NIPA1Q7RTP0 329 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 LMBR1Q8WVP7 490 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 TRAPPC12Q8WVT3 735 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 ZBTB10Q96DT7 871 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 ZSCAN31Q96LW9 406 aaPredicted RBP11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 TBC1D32Q96NH3 1257 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 PCYT2Q99447 389 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 FTOQ9C0B1 505 aaKnown RBP eCLIP11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 SMARCAD1Q9H4L7 1026 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 ERAP1Q9NZ08 941 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 DDX25Q9UHL0 483 aaKnown RBP11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 EMSYQ7Z589 1322 aa11.03□□□□□ -0.64
RTFDC1-205ENST00000466260 MSH4O15457 936 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 SLC37A4O43826 429 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 CCNT1O60563 726 aaKnown RBP11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 GAS7O60861 476 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 MMP1P03956 469 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 IQCF3P0C7M6 154 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 CKBP12277 381 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 THPOP40225 353 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 STAT5BP51692 787 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 PTK7Q13308 1070 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 GRIK4Q16099 956 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 ZNF618Q5T7W0 954 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 LRCH2Q5VUJ6 765 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 MIS18BP1Q6P0N0 1132 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 C16orf59Q7L2K0 433 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 NEK8Q86SG6 692 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 CCDC60Q8IWA6 550 aaPredicted RBP11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 CKAP2LQ8IYA6 745 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 DIS3L2Q8IYB7 885 aaKnown RBP11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 CAGE1Q8TC20 777 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 AFAP1L1Q8TED9 768 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 LENG9Q96B70 501 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 C8orf76Q96K31 380 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 FAM161BQ96MY7 647 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 TEKT3Q9BXF9 490 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 MFRPQ9BY79 579 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 ZNF302Q9NR11 478 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 SH2B1Q9NRF2 756 aaPredicted RBP11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 ARID2Q68CP9 1835 aa11.02□□□□□ -0.65
RTFDC1-205ENST00000466260 GRXCR1A8MXD5 290 aa11.01□□□□□ -0.65
RTFDC1-205ENST00000466260 BTBD18B2RXH4 712 aa11.01□□□□□ -0.65
RTFDC1-205ENST00000466260 DHX15O43143 795 aaKnown RBP11.01□□□□□ -0.65
RTFDC1-205ENST00000466260 MARCH6O60337 910 aa11.01□□□□□ -0.65
RTFDC1-205ENST00000466260 LGR5O75473 907 aa11.01□□□□□ -0.65
RTFDC1-205ENST00000466260 FGBP02675 491 aa11.01□□□□□ -0.65
RTFDC1-205ENST00000466260 GNAT1P11488 350 aa11.01□□□□□ -0.65
RTFDC1-205ENST00000466260 SELPP16109 830 aa11.01□□□□□ -0.65
RTFDC1-205ENST00000466260 ATP2B1P20020 1258 aa11.01□□□□□ -0.65
RTFDC1-205ENST00000466260 CIITAP33076 1130 aa11.01□□□□□ -0.65
RTFDC1-205ENST00000466260 USP11P51784 963 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms