RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 GPR20Q99678 358 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 HSD17B14Q9BPX1 270 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 HMX1Q9NP08 348 aaPredicted RBP18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 SAMM50Q9Y512 469 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 A0A1B0GVL5 298 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 UBA7P41226 1012 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 KRT79Q5XKE5 535 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 TLK2Q86UE8 772 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 RDM1Q8NG50 284 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 PPTC7Q8NI37 304 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 EIF2AK1Q9BQI3 630 aaKnown RBP18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 CCSER1Q9C0I3 900 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 RGL1Q9NZL6 768 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 HPSEQ9Y251 543 aa18.96■□□□□ 0.63
EXOSC3-203ENST00000465229 NOP56O00567 594 aaKnown RBP18.95■□□□□ 0.62
EXOSC3-203ENST00000465229 SPATA31C1P0DKV0 1188 aa18.95■□□□□ 0.62
EXOSC3-203ENST00000465229 CABP7Q86V35 215 aa18.95■□□□□ 0.62
EXOSC3-203ENST00000465229 SNX29Q8TEQ0 813 aa18.95■□□□□ 0.62
EXOSC3-203ENST00000465229 DDX20Q9UHI6 824 aaKnown RBP18.95■□□□□ 0.62
EXOSC3-203ENST00000465229 DOCK5Q9H7D0 1870 aa18.95■□□□□ 0.62
EXOSC3-203ENST00000465229 MED24O75448 989 aa18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 SLITRK3O94933 977 aa18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 SUPT20HL2P0C7V6 817 aa18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 RARBP10826 455 aa18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 PFKFB1P16118 471 aa18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 IRX5P78411 483 aaPredicted RBP18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 STX1AQ16623 288 aa18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 ANO6Q4KMQ2 910 aa18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 MIS18BP1Q6P0N0 1132 aa18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 CATSPER3Q86XQ3 398 aa18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 ERMNQ8TAM6 284 aa18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 DYDC2Q96IM9 177 aa18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 POLR3CQ9BUI4 534 aaPredicted RBP18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 AP5M1Q9H0R1 490 aa18.94■□□□□ 0.62
EXOSC3-203ENST00000465229 IGKV6D-21A0A0A0MT36 114 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 A6NJR5 290 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 ESPNB1AK53 854 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 ZNF202O95125 648 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 P4HBP07237 508 aaKnown RBP18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 PSAPP07602 524 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 RPA1P27694 616 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 TCF7P36402 384 aaPredicted RBP18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 CCT6AP40227 531 aaKnown RBP18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 GJA9P57773 515 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 CYP4A11Q02928 519 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 KARSQ15046 597 aaKnown RBP18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 MTFR1Q15390 333 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 ECM1Q16610 540 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 LHX8Q68G74 356 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 SWSAP1Q6NVH7 229 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 ELOA2Q8IYF1 753 aaPredicted RBP18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 PCYT2Q99447 389 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 UNC93B1Q9H1C4 597 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 FAM13BQ9NYF5 915 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 STK24Q9Y6E0 443 aa18.93■□□□□ 0.62
EXOSC3-203ENST00000465229 A0A087X0B3 334 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 PPFIA4O75335 1185 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 MMP3P08254 477 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 HOXD8P13378 290 aaPredicted RBP18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 CTTNQ14247 550 aaKnown RBP18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 ZRSR1Q15695 479 aaKnown RBP18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 HAUS3Q68CZ6 603 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 CCDC60Q8IWA6 550 aaPredicted RBP18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 BANK1Q8NDB2 785 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 PNMA5Q96PV4 448 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 UPF3AQ9H1J1 476 aaKnown RBP18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 ANO10Q9NW15 660 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 WRAP73Q9P2S5 460 aaPredicted RBP18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 CCDC39Q9UFE4 941 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 KCNH3Q9ULD8 1083 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 SYNRGQ9UMZ2 1314 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 MSCO60682 206 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 PGK1P00558 417 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 MYCP01106 439 aaPredicted RBP18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 TXLNAP40222 546 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 NKX3-2P78367 333 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 GRB10Q13322 594 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 FSCN1Q16658 493 aaKnown RBP18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 UGCGQ16739 394 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 HYIQ5T013 277 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 TPH2Q8IWU9 490 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 NEK9Q8TD19 979 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 PLIN2Q99541 437 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 CBX8Q9HC52 389 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 TUFT1Q9NNX1 390 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 XPNPEP3Q9NQH7 507 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 GABBR1Q9UBS5 961 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 USP25Q9UHP3 1055 aa18.92■□□□□ 0.62
EXOSC3-203ENST00000465229 POTEB3A0JP26 581 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 MYADML2A6NDP7 307 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 BACH1O14867 736 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 SLC26A4O43511 780 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 ADAMTS4O75173 837 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 LGR5O75473 907 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 CCL5P13501 91 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 SYKP43405 635 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 QARSP47897 775 aaKnown RBP18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 ZNF165P49910 485 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 BEX3Q00994 111 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms