RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 TDP2O95551 362 aa23.62■■□□□ 1.37
CD58-204ENST00000464088 U2AF2P26368 475 aaKnown RBP eCLIP23.62■■□□□ 1.37
CD58-204ENST00000464088 LAMC2Q13753 1193 aa23.62■■□□□ 1.37
CD58-204ENST00000464088 NEDD9Q14511 834 aa23.62■■□□□ 1.37
CD58-204ENST00000464088 LARP1BQ659C4 914 aaKnown RBP23.62■■□□□ 1.37
CD58-204ENST00000464088 DHX37Q8IY37 1157 aaKnown RBP23.62■■□□□ 1.37
CD58-204ENST00000464088 EPHX3Q9H6B9 360 aa23.62■■□□□ 1.37
CD58-204ENST00000464088 AGO4Q9HCK5 861 aaKnown RBP23.62■■□□□ 1.37
CD58-204ENST00000464088 HCN4Q9Y3Q4 1203 aa23.62■■□□□ 1.37
CD58-204ENST00000464088 SETQ01105 290 aaPredicted RBP23.61■■□□□ 1.37
CD58-204ENST00000464088 Q4G0T1 1027 aa23.61■■□□□ 1.37
CD58-204ENST00000464088 PRR16Q569H4 304 aa23.61■■□□□ 1.37
CD58-204ENST00000464088 METTL7BQ6UX53 244 aa23.61■■□□□ 1.37
CD58-204ENST00000464088 AFG1LQ8WV93 481 aa23.61■■□□□ 1.37
CD58-204ENST00000464088 SCLYQ96I15 445 aa23.61■■□□□ 1.37
CD58-204ENST00000464088 SCN5AQ14524 2016 aa23.6■■□□□ 1.37
CD58-204ENST00000464088 ZBBXA8MT70 800 aa23.6■■□□□ 1.37
CD58-204ENST00000464088 GTPBP6O43824 516 aaPredicted RBP23.6■■□□□ 1.37
CD58-204ENST00000464088 TLL1O43897 1013 aa23.6■■□□□ 1.37
CD58-204ENST00000464088 CPT1AP50416 773 aa23.6■■□□□ 1.37
CD58-204ENST00000464088 ITGB3BPQ13352 177 aaPredicted RBP23.6■■□□□ 1.37
CD58-204ENST00000464088 SKIV2LQ15477 1246 aaKnown RBP23.6■■□□□ 1.37
CD58-204ENST00000464088 LETM2Q2VYF4 491 aa23.6■■□□□ 1.37
CD58-204ENST00000464088 HSDL1Q3SXM5 330 aa23.6■■□□□ 1.37
CD58-204ENST00000464088 PPP4R3AQ6IN85 833 aa23.6■■□□□ 1.37
CD58-204ENST00000464088 CYFIP1Q7L576 1253 aa23.6■■□□□ 1.37
CD58-204ENST00000464088 NOSTRINQ8IVI9 506 aa23.6■■□□□ 1.37
CD58-204ENST00000464088 GIMAP8Q8ND71 665 aaPredicted RBP23.6■■□□□ 1.37
CD58-204ENST00000464088 PPTC7Q8NI37 304 aa23.6■■□□□ 1.37
CD58-204ENST00000464088 NFASCO94856 1347 aa23.59■■□□□ 1.37
CD58-204ENST00000464088 RFXAPO00287 272 aa23.59■■□□□ 1.37
CD58-204ENST00000464088 WNT7AO00755 349 aa23.59■■□□□ 1.37
CD58-204ENST00000464088 SORBS3O60504 671 aa23.59■■□□□ 1.37
CD58-204ENST00000464088 CA3P07451 260 aa23.59■■□□□ 1.37
CD58-204ENST00000464088 MMP3P08254 477 aa23.59■■□□□ 1.37
CD58-204ENST00000464088 HOXD8P13378 290 aaPredicted RBP23.59■■□□□ 1.37
CD58-204ENST00000464088 PSMC6P62333 389 aa23.59■■□□□ 1.37
CD58-204ENST00000464088 MLXIPQ9HAP2 919 aa23.59■■□□□ 1.37
CD58-204ENST00000464088 PKD2L1Q9P0L9 805 aa23.59■■□□□ 1.37
CD58-204ENST00000464088 TELO2Q9Y4R8 837 aa23.59■■□□□ 1.37
CD58-204ENST00000464088 H3BQV1 296 aa23.58■■□□□ 1.37
CD58-204ENST00000464088 DHX15O43143 795 aaKnown RBP23.58■■□□□ 1.37
CD58-204ENST00000464088 SUPT20HL2P0C7V6 817 aa23.58■■□□□ 1.37
CD58-204ENST00000464088 GCFC2P16383 781 aaKnown RBP23.58■■□□□ 1.37
CD58-204ENST00000464088 PDCP20941 246 aa23.58■■□□□ 1.37
CD58-204ENST00000464088 PHOSPHO2Q8TCD6 241 aa23.58■■□□□ 1.37
CD58-204ENST00000464088 SPATA33Q96N06 139 aa23.58■■□□□ 1.37
CD58-204ENST00000464088 SCN10AQ9Y5Y9 1956 aa23.58■■□□□ 1.36
CD58-204ENST00000464088 EPOPA6NHQ4 379 aa23.57■■□□□ 1.36
CD58-204ENST00000464088 MSH4O15457 936 aa23.57■■□□□ 1.36
CD58-204ENST00000464088 SLC37A4O43826 429 aa23.57■■□□□ 1.36
CD58-204ENST00000464088 SYT1P21579 422 aa23.57■■□□□ 1.36
CD58-204ENST00000464088 PURAQ00577 322 aaKnown RBP23.57■■□□□ 1.36
CD58-204ENST00000464088 TMEM31Q5JXX7 168 aa23.57■■□□□ 1.36
CD58-204ENST00000464088 SLC9A7Q96T83 725 aa23.57■■□□□ 1.36
CD58-204ENST00000464088 GPR20Q99678 358 aa23.57■■□□□ 1.36
CD58-204ENST00000464088 NAP1L4Q99733 375 aaKnown RBP23.57■■□□□ 1.36
CD58-204ENST00000464088 DDX25Q9UHL0 483 aaKnown RBP23.57■■□□□ 1.36
CD58-204ENST00000464088 IPO5O00410 1097 aaKnown RBP23.56■■□□□ 1.36
CD58-204ENST00000464088 CCNT1O60563 726 aaKnown RBP23.56■■□□□ 1.36
CD58-204ENST00000464088 GPR37L1O60883 481 aa23.56■■□□□ 1.36
CD58-204ENST00000464088 BRDTQ58F21 947 aaPredicted RBP23.56■■□□□ 1.36
CD58-204ENST00000464088 ETNPPLQ8TBG4 499 aa23.56■■□□□ 1.36
CD58-204ENST00000464088 ZNF577Q9BSK1 485 aa23.56■■□□□ 1.36
CD58-204ENST00000464088 POLR3EQ9NVU0 708 aa23.56■■□□□ 1.36
CD58-204ENST00000464088 KPNA6O60684 536 aa23.55■■□□□ 1.36
CD58-204ENST00000464088 RFC2P35250 354 aa23.55■■□□□ 1.36
CD58-204ENST00000464088 TAP1Q03518 808 aa23.55■■□□□ 1.36
CD58-204ENST00000464088 GNL2Q13823 731 aaKnown RBP23.55■■□□□ 1.36
CD58-204ENST00000464088 SLC5A5Q92911 643 aa23.55■■□□□ 1.36
CD58-204ENST00000464088 HLA-CQ95604 372 aa23.55■■□□□ 1.36
CD58-204ENST00000464088 UIMC1Q96RL1 719 aa23.55■■□□□ 1.36
CD58-204ENST00000464088 SDF4Q9BRK5 362 aa23.55■■□□□ 1.36
CD58-204ENST00000464088 JPH1Q9HDC5 661 aaPredicted RBP23.55■■□□□ 1.36
CD58-204ENST00000464088 TRMT13Q9NUP7 481 aaKnown RBP23.55■■□□□ 1.36
CD58-204ENST00000464088 TANC1Q9C0D5 1861 aa23.55■■□□□ 1.36
CD58-204ENST00000464088 PPFIA4O75335 1185 aa23.54■■□□□ 1.36
CD58-204ENST00000464088 HSP90AA1P07900 732 aaKnown RBP23.54■■□□□ 1.36
CD58-204ENST00000464088 MYL3P08590 195 aa23.54■■□□□ 1.36
CD58-204ENST00000464088 CYP2C9P11712 490 aa23.54■■□□□ 1.36
CD58-204ENST00000464088 ACTN1P12814 892 aa23.54■■□□□ 1.36
CD58-204ENST00000464088 DGKDQ16760 1214 aa23.54■■□□□ 1.36
CD58-204ENST00000464088 MCTP1Q6DN14 999 aa23.54■■□□□ 1.36
CD58-204ENST00000464088 CERS4Q9HA82 394 aa23.54■■□□□ 1.36
CD58-204ENST00000464088 KCNMB3Q9NPA1 279 aa23.54■■□□□ 1.36
CD58-204ENST00000464088 C11orf16Q9NQ32 467 aa23.54■■□□□ 1.36
CD58-204ENST00000464088 TBC1D22BQ9NU19 505 aa23.54■■□□□ 1.36
CD58-204ENST00000464088 SLC9A2Q9UBY0 812 aa23.54■■□□□ 1.36
CD58-204ENST00000464088 GSTTP1A0A1W2PQM5 241 aa23.53■■□□□ 1.36
CD58-204ENST00000464088 CCNE2O96020 404 aa23.53■■□□□ 1.36
CD58-204ENST00000464088 TRAPPC10P48553 1259 aa23.53■■□□□ 1.36
CD58-204ENST00000464088 TOB1P50616 345 aaPredicted RBP23.53■■□□□ 1.36
CD58-204ENST00000464088 DEFB128Q7Z7B8 93 aa23.53■■□□□ 1.36
CD58-204ENST00000464088 KAT2BQ92831 832 aa23.53■■□□□ 1.36
CD58-204ENST00000464088 GJA10Q969M2 543 aa23.53■■□□□ 1.36
CD58-204ENST00000464088 RIT2Q99578 217 aa23.53■■□□□ 1.36
CD58-204ENST00000464088 MTMR6Q9Y217 621 aa23.53■■□□□ 1.36
CD58-204ENST00000464088 VPS37CA5D8V6 355 aaPredicted RBP23.52■■□□□ 1.36
CD58-204ENST00000464088 NOP56O00567 594 aaKnown RBP23.52■■□□□ 1.36
CD58-204ENST00000464088 PSMD10O75832 226 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms