RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 C8orf48Q96LL4 319 aa8.04□□□□□ -1.12
VPS8-216ENST00000463687 CRNKL1Q9BZJ0 848 aaKnown RBP8.04□□□□□ -1.12
VPS8-216ENST00000463687 UBE2OQ9C0C9 1292 aaKnown RBP8.04□□□□□ -1.12
VPS8-216ENST00000463687 PUS7LQ9H0K6 701 aaKnown RBP8.04□□□□□ -1.12
VPS8-216ENST00000463687 OSBPL5Q9H0X9 879 aaPredicted RBP8.04□□□□□ -1.12
VPS8-216ENST00000463687 DHX36Q9H2U1 1008 aaKnown RBP8.04□□□□□ -1.12
VPS8-216ENST00000463687 CNTNAP1P78357 1384 aa8.04□□□□□ -1.12
VPS8-216ENST00000463687 RPAP1Q9BWH6 1393 aaPredicted RBP8.04□□□□□ -1.12
VPS8-216ENST00000463687 FLT1P17948 1338 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 A0A1B0GUL6 1792 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 ADAMTSL1Q8N6G6 1762 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 RFX7Q2KHR2 1363 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 RASSF10A6NK89 507 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 RFPL3O75679 317 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 MBD4O95243 580 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 CHGBP05060 677 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 IREB2P48200 963 aaKnown RBP8.03□□□□□ -1.12
VPS8-216ENST00000463687 HUNKP57058 714 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 HTRA3P83110 453 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 PTPN11Q06124 597 aaPredicted RBP8.03□□□□□ -1.12
VPS8-216ENST00000463687 PABPC4Q13310 644 aaKnown RBP eCLIP8.03□□□□□ -1.12
VPS8-216ENST00000463687 PRKG1Q13976 671 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 IKBKEQ14164 716 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 DEFB115Q30KQ5 88 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 AXDND1Q5T1B0 1012 aaPredicted RBP8.03□□□□□ -1.12
VPS8-216ENST00000463687 TTC22Q5TAA0 569 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 VN1R5Q7Z5H4 357 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 DDX42Q86XP3 938 aaKnown RBP eCLIP8.03□□□□□ -1.12
VPS8-216ENST00000463687 LCORLQ8N3X6 602 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 OSBP2Q969R2 916 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 ABHD17AQ96GS6 310 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 ARMT1Q9H993 441 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 GMIPQ9P107 970 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 PI4KBQ9UBF8 816 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 PCDHA4Q9UN74 947 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 SOX13Q9UN79 622 aa8.03□□□□□ -1.12
VPS8-216ENST00000463687 ANGEL1Q9UNK9 670 aaKnown RBP8.03□□□□□ -1.12
VPS8-216ENST00000463687 CCDC88AQ3V6T2 1871 aa8.02□□□□□ -1.12
VPS8-216ENST00000463687 ATRNL1Q5VV63 1379 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 DDTLA6NHG4 134 aaPredicted RBP8.02□□□□□ -1.13
VPS8-216ENST00000463687 HIP1O00291 1037 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 GPAA1O43292 621 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 SUSD5O60279 629 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 EIF4EBP3O60516 100 aaPredicted RBP8.02□□□□□ -1.13
VPS8-216ENST00000463687 USP2O75604 605 aaPredicted RBP8.02□□□□□ -1.13
VPS8-216ENST00000463687 HLA-DOAP06340 250 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 GSTP1P09211 210 aaKnown RBP8.02□□□□□ -1.13
VPS8-216ENST00000463687 GSPT1P15170 499 aaKnown RBP8.02□□□□□ -1.13
VPS8-216ENST00000463687 CPEP16870 476 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 GNAT2P19087 354 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 GSK3AP49840 483 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 ZMYM1Q5SVZ6 1142 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 KIAA1211LQ6NV74 962 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 RGMBQ6NW40 437 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 FOXR1Q6PIV2 292 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 UNC5AQ6ZN44 842 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 MIGA2Q7L4E1 593 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 FOXP4Q8IVH2 680 aaPredicted RBP8.02□□□□□ -1.13
VPS8-216ENST00000463687 ATL2Q8NHH9 583 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 RELTQ969Z4 430 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 GMCL1Q96IK5 515 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 STRBPQ96SI9 672 aaKnown RBP8.02□□□□□ -1.13
VPS8-216ENST00000463687 KIF2CQ99661 725 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 CDC6Q99741 560 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 ZNF341Q9BYN7 854 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 HELLSQ9NRZ9 838 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 ATP8A2Q9NTI2 1148 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 DNAJB12Q9NXW2 375 aaKnown RBP8.02□□□□□ -1.13
VPS8-216ENST00000463687 ATXN7L1Q9ULK2 861 aaPredicted RBP8.02□□□□□ -1.13
VPS8-216ENST00000463687 PHF24Q9UPV7 400 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 ARAP2Q8WZ64 1704 aa8.02□□□□□ -1.13
VPS8-216ENST00000463687 UPK3BL1B0FP48 263 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 UPK3BL2E5RIL1 263 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 UBE2Q2LH0YL09 131 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 M0R2C6 588 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 PRKAB2O43741 272 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 ESRRAP11474 423 aaPredicted RBP8.01□□□□□ -1.13
VPS8-216ENST00000463687 SDSP20132 328 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 ECE1P42892 770 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 SLC7A5Q01650 507 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 PDE4BQ07343 736 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 SLC10A6Q3KNW5 377 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 MCMDC2Q4G0Z9 681 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 RNFT1Q5M7Z0 435 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 ADAMTSL4Q6UY14 1074 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.01□□□□□ -1.13
VPS8-216ENST00000463687 MOB2Q70IA6 237 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 HDXQ7Z353 690 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 WDR75Q8IWA0 830 aaKnown RBP8.01□□□□□ -1.13
VPS8-216ENST00000463687 TMEM151AQ8N4L1 468 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.01□□□□□ -1.13
VPS8-216ENST00000463687 SDR42E1Q8WUS8 393 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 SEC62Q99442 399 aaKnown RBP8.01□□□□□ -1.13
VPS8-216ENST00000463687 RUSC1Q9BVN2 902 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 COL25A1Q9BXS0 654 aaPredicted RBP8.01□□□□□ -1.13
VPS8-216ENST00000463687 ADAM19Q9H013 955 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 DCP1AQ9NPI6 582 aaPredicted RBP8.01□□□□□ -1.13
VPS8-216ENST00000463687 NDFIP2Q9NV92 336 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 MCM9Q9NXL9 1143 aa8.01□□□□□ -1.13
VPS8-216ENST00000463687 HERC5Q9UII4 1024 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms