RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 COL6A2P12110 1019 aa5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 RAC3P60763 192 aa5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 NRN1LQ496H8 165 aa5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 MTERF2Q49AM1 385 aa5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 CD276Q5ZPR3 534 aa5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 TAX1BP1Q86VP1 789 aa5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 RBM12BQ8IXT5 1001 aaKnown RBP5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 IFNL3Q8IZI9 196 aa5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 ST13P5Q8NFI4 369 aaPredicted RBP5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 UHMK1Q8TAS1 419 aaKnown RBP5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 AJUBAQ96IF1 538 aa5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 ZFYVE21Q9BQ24 234 aa5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 AARSD1Q9BTE6 412 aaKnown RBP5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 CARD11Q9BXL7 1154 aa5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 PPARGC1AQ9UBK2 798 aaKnown RBP5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 WASF3Q9UPY6 502 aa5.27□□□□□ -1.57
SPTLC1-203ENST00000461132 FAM47E-STBD1D6RA91 191 aa5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 PDPK1O15530 556 aa5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 MSCO60682 206 aa5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 NCLP19338 710 aaKnown RBP5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 COMTP21964 271 aa5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 CSF2RBP32927 897 aa5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 TGFB2P61812 414 aa5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 LBX2Q6XYB7 198 aa5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 KCTD1Q719H9 257 aa5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 LRRC47Q8N1G4 583 aaKnown RBP5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 SGSM3Q96HU1 749 aa5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 DNAJC2Q99543 621 aaKnown RBP5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 TACO1Q9BSH4 297 aaKnown RBP5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 PCED1AQ9H1Q7 454 aa5.26□□□□□ -1.57
SPTLC1-203ENST00000461132 PRODHO43272 600 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 DLX3O60479 287 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 CUTAO60888 179 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 LTFP02788 710 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 GPR85P60893 370 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 RBL2Q08999 1139 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 IFRD2Q12894 506 aaPredicted RBP5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 R3HDM1Q15032 1099 aaKnown RBP5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 ZMAT1Q5H9K5 638 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 CRB2Q5IJ48 1285 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 TCTN3Q6NUS6 607 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 NSMFQ6X4W1 530 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 PROSER1Q86XN7 944 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 WDR48Q8TAF3 677 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 NEIL1Q96FI4 390 aaPredicted RBP5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 WWC2-AS2Q96NR7 200 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 CCDC113Q9H0I3 377 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 CDIP1Q9H305 208 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 KCND1Q9NSA2 647 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 ARHGAP28Q9P2N2 729 aa5.25□□□□□ -1.57
SPTLC1-203ENST00000461132 ZNF839A8K0R7 811 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 PPM1GO15355 546 aaPredicted RBP5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 FOXS1O43638 330 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 SOD2P04179 222 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 APPP05067 770 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 POLD1P28340 1107 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 RRADP55042 308 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 SSRP1Q08945 709 aaKnown RBP5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 ABHD18Q0P651 414 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 KLF10Q13118 480 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 FOXE3Q13461 319 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 RASGRF1Q13972 1273 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 FHL2Q14192 279 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 USP39Q53GS9 565 aaKnown RBP5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 NLGN4XQ8N0W4 816 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 FAM89AQ96GI7 184 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 SRPK1Q96SB4 655 aaKnown RBP5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 KATNBL1Q9H079 304 aa5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 C12orf65Q9H3J6 166 aaKnown RBP5.24□□□□□ -1.57
SPTLC1-203ENST00000461132 TRAV20A0A0B4J274 112 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 ESYT3A0FGR9 886 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 NPIPB8E9PQR5 432 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 NKRFO15226 690 aaKnown RBP eCLIP5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 CDC14BO60729 498 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 MCM7P33993 719 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 WDR72Q3MJ13 1102 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 KCNT2Q6UVM3 1135 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 RNF207Q6ZRF8 634 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 SPATC1Q76KD6 591 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 IPO9Q96P70 1041 aaKnown RBP5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 DEPDC7Q96QD5 511 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 CDC6Q99741 560 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 PFDN2Q9UHV9 154 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 MSRB2Q9Y3D2 182 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 NR2E1Q9Y466 385 aa5.23□□□□□ -1.57
SPTLC1-203ENST00000461132 ZNF888P0CJ79 500 aaPredicted RBP5.22□□□□□ -1.57
SPTLC1-203ENST00000461132 FGFR1P11362 822 aa5.22□□□□□ -1.57
SPTLC1-203ENST00000461132 PABPC1P11940 636 aaKnown RBP5.22□□□□□ -1.57
SPTLC1-203ENST00000461132 CR2P20023 1033 aa5.22□□□□□ -1.57
SPTLC1-203ENST00000461132 BTBD8Q5XKL5 378 aa5.22□□□□□ -1.57
SPTLC1-203ENST00000461132 STYK1Q6J9G0 422 aa5.22□□□□□ -1.57
SPTLC1-203ENST00000461132 POLNQ7Z5Q5 900 aa5.22□□□□□ -1.57
SPTLC1-203ENST00000461132 EDAQ92838 391 aa5.22□□□□□ -1.57
SPTLC1-203ENST00000461132 ZNF669Q96BR6 464 aaPredicted RBP5.22□□□□□ -1.57
SPTLC1-203ENST00000461132 SCYL1Q96KG9 808 aa5.22□□□□□ -1.57
SPTLC1-203ENST00000461132 OR14A2Q96R54 314 aa5.22□□□□□ -1.57
SPTLC1-203ENST00000461132 SPATA9Q9BWV2 254 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms