RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 PROCA1Q8NCQ7 364 aaPredicted RBP16.95■□□□□ 0.3
SSR4-206ENST00000460616 SCFD2Q8WU76 684 aa16.95■□□□□ 0.3
SSR4-206ENST00000460616 NSMCE1Q8WV22 266 aa16.95■□□□□ 0.3
SSR4-206ENST00000460616 TBC1D5Q92609 795 aa16.95■□□□□ 0.3
SSR4-206ENST00000460616 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.95■□□□□ 0.3
SSR4-206ENST00000460616 NUCKS1Q9H1E3 243 aaKnown RBP16.95■□□□□ 0.3
SSR4-206ENST00000460616 EBF2Q9HAK2 575 aa16.95■□□□□ 0.3
SSR4-206ENST00000460616 BATF3Q9NR55 127 aa16.95■□□□□ 0.3
SSR4-206ENST00000460616 ABCB11O95342 1321 aa16.95■□□□□ 0.3
SSR4-206ENST00000460616 FLT1P17948 1338 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 CES2O00748 559 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 TLR2O60603 784 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 SKAP2O75563 359 aaPredicted RBP16.94■□□□□ 0.3
SSR4-206ENST00000460616 KRT71Q3SY84 523 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 CRELD2Q6UXH1 353 aaPredicted RBP16.94■□□□□ 0.3
SSR4-206ENST00000460616 ANKS1AQ92625 1134 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 STAMBPL1Q96FJ0 436 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 THOC1Q96FV9 657 aaKnown RBP16.94■□□□□ 0.3
SSR4-206ENST00000460616 PSMD1Q99460 953 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 CNOT10Q9H9A5 744 aaKnown RBP16.94■□□□□ 0.3
SSR4-206ENST00000460616 SH3GLB2Q9NR46 395 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 SART1O43290 800 aaKnown RBP16.94■□□□□ 0.3
SSR4-206ENST00000460616 CLTAP09496 248 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 PRPHP41219 470 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 KCNMA1Q12791 1236 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 MYO1EQ12965 1108 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 SLC18A3Q16572 532 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 CRY2Q49AN0 593 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 ARHGAP27Q6ZUM4 889 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 CCDC63Q8NA47 563 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 MDM1Q8TC05 714 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 TCP11Q8WWU5 503 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 SYN2Q92777 582 aaPredicted RBP16.94■□□□□ 0.3
SSR4-206ENST00000460616 AK8Q96MA6 479 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 ABCF2Q9UG63 623 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 PCDHA6Q9UN73 950 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 PCDHA8Q9Y5H6 950 aa16.94■□□□□ 0.3
SSR4-206ENST00000460616 CEP104O60308 925 aa16.93■□□□□ 0.3
SSR4-206ENST00000460616 FGRP09769 529 aa16.93■□□□□ 0.3
SSR4-206ENST00000460616 CCNHP51946 323 aaPredicted RBP16.93■□□□□ 0.3
SSR4-206ENST00000460616 FAM83BQ5T0W9 1011 aa16.93■□□□□ 0.3
SSR4-206ENST00000460616 ERMARDQ5T6L9 678 aa16.93■□□□□ 0.3
SSR4-206ENST00000460616 XPO6Q96QU8 1125 aaKnown RBP16.93■□□□□ 0.3
SSR4-206ENST00000460616 AP1M1Q9BXS5 423 aa16.93■□□□□ 0.3
SSR4-206ENST00000460616 MTFR1LQ9H019 292 aa16.93■□□□□ 0.3
SSR4-206ENST00000460616 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.93■□□□□ 0.3
SSR4-206ENST00000460616 ATP6V0A2Q9Y487 856 aa16.93■□□□□ 0.3
SSR4-206ENST00000460616 M0R2N6 131 aa16.93■□□□□ 0.3
SSR4-206ENST00000460616 CTNND1O60716 968 aaKnown RBP16.93■□□□□ 0.3
SSR4-206ENST00000460616 PCP11498 1178 aaKnown RBP16.93■□□□□ 0.3
SSR4-206ENST00000460616 PNMA8AQ86V59 439 aaPredicted RBP16.93■□□□□ 0.3
SSR4-206ENST00000460616 CENPTQ96BT3 561 aa16.93■□□□□ 0.3
SSR4-206ENST00000460616 PBKQ96KB5 322 aa16.93■□□□□ 0.3
SSR4-206ENST00000460616 CEP72Q9P209 647 aa16.93■□□□□ 0.3
SSR4-206ENST00000460616 A0A087X0T9 212 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 ANP32DO95626 131 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 FAM228BP0C875 321 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 KIF5BP33176 963 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 GRIK3Q13003 919 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 RIPK1Q13546 671 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 ARMC2Q8NEN0 867 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 ACTRT1Q8TDG2 376 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 BRIP1Q9BX63 1249 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 PACSIN1Q9BY11 444 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 ADAMTS1Q9UHI8 967 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 DAPK3O43293 454 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 GSTA1P08263 222 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 ARID5AQ03989 594 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 DHX9Q08211 1270 aaKnown RBP16.92■□□□□ 0.3
SSR4-206ENST00000460616 FAM47AQ5JRC9 791 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 TMC3Q7Z5M5 1100 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 FAM129AQ9BZQ8 928 aa16.92■□□□□ 0.3
SSR4-206ENST00000460616 WTIPA6NIX2 430 aaPredicted RBP16.91■□□□□ 0.3
SSR4-206ENST00000460616 BHMG1C9JSJ3 638 aaPredicted RBP16.91■□□□□ 0.3
SSR4-206ENST00000460616 KIF4AO95239 1232 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 CHRNA5P30532 468 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 GCKP35557 465 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 POLR2FP61218 127 aaKnown RBP16.91■□□□□ 0.3
SSR4-206ENST00000460616 LRRC63Q05C16 580 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 C11orf91Q3C1V1 193 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 TBC1D1Q86TI0 1168 aaPredicted RBP16.91■□□□□ 0.3
SSR4-206ENST00000460616 RPGRQ92834 1020 aaKnown RBP16.91■□□□□ 0.3
SSR4-206ENST00000460616 SPDL1Q96EA4 605 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 CALR3Q96L12 384 aaKnown RBP16.91■□□□□ 0.3
SSR4-206ENST00000460616 RIOK1Q9BRS2 568 aaKnown RBP16.91■□□□□ 0.3
SSR4-206ENST00000460616 DDX47Q9H0S4 455 aaKnown RBP16.91■□□□□ 0.3
SSR4-206ENST00000460616 SLC12A4Q9UP95 1085 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 C15orf41Q9Y2V0 281 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 KIF13BQ9NQT8 1826 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 C10orf71Q711Q0 1435 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 BAZ2BQ9UIF8 2168 aaKnown RBP16.91■□□□□ 0.3
SSR4-206ENST00000460616 KLRG2A4D1S0 409 aaPredicted RBP16.91■□□□□ 0.3
SSR4-206ENST00000460616 NOL4O94818 638 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 ENOX2Q16206 610 aaKnown RBP16.91■□□□□ 0.3
SSR4-206ENST00000460616 SV2BQ7L1I2 683 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 GUF1Q8N442 669 aaKnown RBP16.91■□□□□ 0.3
SSR4-206ENST00000460616 CCHCR1Q8TD31 782 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 L3MBTL1Q9Y468 752 aa16.91■□□□□ 0.3
SSR4-206ENST00000460616 USP17L12C9JPN9 530 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 USP17L21D6R901 530 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms